Helicobacter pylori Rif2: C730_06690
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Entry
C730_06690 CDS
T02318
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hei
Helicobacter pylori Rif2
Pathway
hei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C730_06690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hei03021
]
C730_06690
03400 DNA repair and recombination proteins [BR:
hei03400
]
C730_06690
Enzymes [BR:
hei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C730_06690
Transcription machinery [BR:
hei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C730_06690
DNA repair and recombination proteins [BR:
hei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C730_06690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
AFV45699
LinkDB
All DBs
Position
complement(1367741..1368775)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEQIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggctcttgcttttaagctctgtggggtatgctcctgtaggtttaaag
attgaaggcgtccatcatgagtttgactctttaaggggggttactgaagacgtgtcgctt
tttatcatgaatttaaaaaatatccgctttatagccaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgagcagatagaaatcgtcaatccggaaatgcccctagcgaca
atcaatgaagacgctcaattgaatttttcgctcattatttataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgagggctacatgccgctagacggctctttc
acgccgattaaaaaggtcgtttatgagattgaaaacgttctggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgagcaagcaattgggtgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagacttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaagggcgtgaaaaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccctgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
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