Helicobacter pylori Rif2: C730_06960
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Entry
C730_06960 CDS
T02318
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hei
Helicobacter pylori Rif2
Pathway
hei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C730_06960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hei03400
]
C730_06960
Enzymes [BR:
hei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C730_06960
DNA repair and recombination proteins [BR:
hei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C730_06960
Prokaryotic type
C730_06960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFV45753
LinkDB
All DBs
Position
complement(1407200..1407901)
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKIPKTIFPKSSNLFYALNLTPPC
AVKIILLGQDPYHSTYLENDQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHQYIGWEAFSDQILMRLFETTAPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYREVYRKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttgagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacctagaagccctaaaaatccct
aaaaccattttccctaaaagctctaatctgttttatgcgctcaatctaacgcccccttgt
gcggttaaaatcatccttttagggcaagacccctaccattccacctacctagaaaatgat
caagaattgccggtggcgatggggttgagctttagcgtggaaaaaaacgcccctattcct
ccaagtttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtggggatttgagcgcatgggctaaaaggggcatgctcttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcaccaatatattggctgggaagcttttagcgatcaa
atactgatgcgcctttttgaaacgaccgcccctttaatcgtggtgttactagggaaagtc
gcccaaaaaaagatcgcgttaatccccaaaaacaaacacatcatcatcacagcccctcac
cctagcccactatctagggggtttttagggagtggggtttttacaagcgttcaaaaagct
tatagagaggtttatcgcaaggattttgattttagtttatga
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