Heliangelus exortis (tourmaline sunangel): 139788532
Help
Entry
139788532 CDS
T12045
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
hek
Heliangelus exortis (tourmaline sunangel)
Pathway
hek03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hek00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139788532 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hek03041
]
139788532 (DDX42)
Enzymes [BR:
hek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139788532 (DDX42)
Spliceosome [BR:
hek03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
139788532 (DDX42)
Complex B
139788532 (DDX42)
Complex C
U2 SnRNP specific factors
139788532 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
DUF460
Motif
Other DBs
NCBI-GeneID:
139788532
NCBI-ProteinID:
XP_071584649
LinkDB
All DBs
Position
29:complement(2465391..2493369)
Genome browser
AA seq
1008 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFPKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVELPYIPAENSPTRQQLHSKAADSDSDDDPLEAFM
AEVEDQAARDMKRLEDKDKEKKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ
VRSVASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKV
ISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENSDRGNNNNVMSNYEAYKPSSGAMGDRLTAMKAAFQSQYKSHFVAASLNNQ
KTGSSATGASGWTSAGSLNSVPTSSAQQNPTNPDGPAAAAKGVPGFSSTGSLSSLPSFPS
GGAQGFNNTNISTNSREGGGNPSGGGGGGGGGGGGGGIVRERYPDNRNSRHNELPRRGEG
GGGRYNEVQRHGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRHSDAYRHGEGRHGDNHR
HGESRHFSEGGSGNRNNGDSRNSNDGRNNENRNNENRNGENRKEPNSRDNKTDGFAVPEP
PKQDFLGFLGTGLLSRWRKRRREPCKLPMQGWDTSAARFTRMMCTHSA
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaaaggtggacctggtaccaagagaggctttggttttgggggctttgcc
ataacccctggcaagaaggaggagcccaagctctcccagcagtctcacagtgcttttggc
acagctgggtcttctgctgccttccccaaatcagcacctcctcagctgccttctttctac
aaaattgggtcaaaaagagcaaattttgatgaagagaacgcgtattttgaggatgaagag
gaagattccagcaatgtggaactgccttacattcctgcagagaattcccccactcgccag
cagctccactccaaggcagcagactctgacagtgatgatgaccccctggaggctttcatg
gctgaagtggaggatcaagctgctcgagacatgaagagacttgaggataaagacaaagaa
aagaagaatgttaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgctacatggctgaaaaccccactgctggtgtggtccaagaagaggaagaagataac
ctggaatatgacagtgatgggaatccaattgcaccatccaaaaaaatcattgatcctctc
ccacccattgaccattcagagattgaatatccaccatttgagaaaaatttctatgatgag
catgaggaaatcaccagtctcaccccccagcaagtggtggaactacgtcataaattaaat
cttagggtctctggtgctgctcctccaaggcctggcagtagttttgctcattttgggttt
gatgagcaacttatgcatcaaattaggaaatctgagtatacccagcccactcctatacag
tgtcagggtgttccagttgcactgagtggcagggatatgattgggatagctaaaactgga
agtgggaaaacagcagccttcatctggcccatgttgatccacatcatggatcaaaaggag
cttgaaccaggggatggtcccattgcagtcatcgtgtgtcccaccagggagctttgccaa
cagatccattctgagtgtaaacgttttggcaaggcctacaatttgcgctcggtggctgtg
tatggaggaggaagcatgtgggagcaagccaaagccctccaggagggggcagagatagtt
gtctgcacaccaggtcgtttaattgatcatgtgaaaaagaaagctacaaaccttcaaaga
gtcacttaccttgtgtttgatgaagctgacagaatgtttgatatgggttttgaatatcag
gtcagatcagttgcaagccacgtacgtcctgacagacagaccctcttgttcagtgccact
ttccgtaagaagattgaaaagttggctcgagatattctgattgacccaattcgagtggtg
cagggagacattggagaggcaaatgaagatgttactcaaattgtggagattttcccctct
gggccaagcaagtggaattggctgactcgacgcctggtggagttcacatcttctgggagt
gtcctcctgtttgtcaccaaaaaggccaatgcagaagagctggccaataacctgaagcag
gaggatcacaatctggggctgcttcatggtgacatggaccagagtgagaggaataaagtc
atttcagaatttaagaaaaaggggatccccatactggtagctacagatgtggcagctagg
gggttggatatcccttccatcaagactgtcatcaactatgatgtggctcgggacatagac
actcacacccacaggattggtcgtactggcagagcaggggagaagggagttgcctacact
ctgctgacccccaaagacagtaactttgctggtgatcttgtcagaaatctggaaggtgct
aatcaacacgtttccaaagagctgttggatctagcaatgcagaacccatggttcaggaaa
tcccgtttcaaaggaggaaaaggcaagaagctgaatattggtggtggtggcttgggatac
agggaacgtcctggtctgggctcagaaaactctgatcgtggaaacaacaacaatgtgatg
agtaactatgaggcatacaaaccatccagtggggcaatgggggacagacttacagcaatg
aaagcagcttttcagtcccagtataagagccactttgttgctgcaagtttaaataatcaa
aagactggcagctctgccactggtgccagtggctggaccagtgctgggagtttgaactca
gtccctaccagttcagcacagcaaaaccccacaaaccccgacggccccgccgcggcagca
aaaggtgtcccgggtttcagcagcacggggagcctgagcagccttcccagcttcccaagt
gggggagcccagggcttcaacaacacaaacatcagcaccaacagtcgagaaggtggtggc
aaccccagtggtggtggtggtggtggtggtggtggtggtggtggtggtggcatcgtcagg
gaacgctaccccgacaaccggaacagtcgccacaacgagctgccccgccgtggagagggg
ggtggtggtcgctacaacgaggtgcaacgccatggagaaggaggaggaggaggtggagga
ggtggtggaggaggaggaggaggtggtggaggtggaggaggaggaggaggaggaggtggt
ggtggccgccacagtgacgcttaccgccacggcgagggccggcacggtgacaaccaccgg
cacggggagagcaggcacttcagtgaggggggcagtggcaatcgtaacaatggtgacagc
aggaacagcaacgatgggaggaacaatgagaacaggaacaacgagaacaggaacggggag
aacaggaaggagcccaacagccgagacaacaagacagatgggtttgctgtccccgagcct
ccaaaacaggatttcttggggtttttgggaactgggttgttgagcagatggaggaagagg
agaagggaaccatgcaaactgcccatgcaaggctgggatacatctgcagccagattcact
cgaatgatgtgtacacacagtgcttaa
DBGET
integrated database retrieval system
