Heliangelus exortis (tourmaline sunangel): 139789331
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Entry
139789331 CDS
T12045
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
hek Heliangelus exortis (tourmaline sunangel)
Pathway
hek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139789331 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hek03019
]
139789331 (SKIC3)
Messenger RNA biogenesis [BR:
hek03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
139789331 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_11
TPR_16
TPR_17
TPR_8
TPR_12
CFAP70_TPR_C
TPR_CcmH_CycH
CFAP70_mid_TPR
ANAPC3
TPR_9
TTC22_N
CABIN1_N
ARM_TT21_C
TPR_15
MSC6_N
DUF928
Retrotran_gag_2
UvrB_3rd
MIT_ATG38
BTAD
HAT_Syf1_M
TPR_5
TPR_Psidin_N
DUF8323
Motif
Other DBs
NCBI-GeneID:
139789331
NCBI-ProteinID:
XP_071585946
LinkDB
All DBs
Position
Z:complement(72808356..72855662)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
AAYKKATELEPNQLLAWQGLANMYEKSKQTDIKGDLADVYQKLLELYESGDKQKWYDVCN
KLVELYHQEKKYAEVAETWQKLIQMKQGEGAEKAELHQLWKKMIKLLKDSTQSRDNRAEQ
SLLTAFEHAVNSADTVPGEDHQNLYKDFIQCLSNFPHEAARLEQACNDMMALYPTVSYPL
EVLCLHFVQSGTLSEEAFDCFSRLLEMDASSGPAIIGLGVKFLQEKKYKEAVKSLTEGLQ
LTSQCAGAWHYLAEAQMKIHKHRDAVLSCNRALKALGTPGGPTLRLKNLILRLKAEALIK
IADADAAEEAIKSLEQVEDASNDPVVLALRGQAYLNKGFTDQAAQISQELLLSHPDLAES
HALQGFIHYSQKSYEQAERSFLNAIERKPETAEYHQYLGLTYWFMSDETKRDKGKAHTQF
LKAAKLDSYLGSVFCYLGNYYRDIAGDKGRARGCYRKAFDLDETHEESGEAVVDLSMELG
DMDTALSILNKVTENATAGTAKWAWLHRGLYYLRTDQPSQAVADLQAALRADPKDANCWE
SLGEAYLGRGSYTTALKSFRRATELNPELVYSIYKAAEVEQILGKYENAIATYQEILKKT
EDYVPALKGLGECHLMLARSALDNFYDRRALDYIEQALEFFTRAAKHRPDVSCLWKLLGD
TCTSVHVLSPAKVNIEVLGFLLGKNVEKQMLKKHELLALGGRCYSRALKLMPLPSIWCDL
GISYYRQAEHLRAVGTDMNETSELLQKSLECVKKAVRLDSKNHLFWNALGVVASCKGIEN
YALAQHSFIKSIQAEENNFVAWTNLGVLYLATDNIEQAHEAFKIAQSLEPTYLLCWLGQA
FIAEKVGSYDTMDLFRHTTELRMHNEGAKGYAHWVCSTLQDKSNRNTELYQYNIVQMNAV
PAAHVVLGKYTERNPDDASAFTMLGYLNENLHLKRQAADAYERAASLLKDSGDTEQYNTA
MQNYGRSLCALGQCDKAIEVYTSIPLTDFDGIMGIALAYFKKGLLEESTKAYEKALSIAE
SEEDKAHIMTALALIEYKQDRVDAAKTLLFKCSLKEPTVESLKTLCTLGLVKQDPTLAAA
ALKELLKHEKGHDDIYERCLFTSALYALQDRNVAIQREVSKAIHSNPGNPDLWSLLSRLV
PLYAPHKAKGGAVAGSVAQVLDVNQGKEVLMNIAVNQLAAGCHMLEDEKNNPLKNIQKAI
HLCPDNPAAWAVLMAACHAENTVACLSNSQPKRTGLEMTLVSTVSAKTEENNLPRNYIQT
LEDWCLCQAITSLEETGKLSEAEALCTKGLKSCPEHPGLFLLLRQVQCKQLLQSHKELPD
SVLEELHKTVMTSSSSVAAWQWLANVYKSQRMMVGAEMCYRKSLQLASQQGSWSGKLSSL
LRLAMLALEICMANASNDHWTSLVQEATAEALKLSPCPVASLLQALLQYSCKMGARETRR
MLERVVYQPGNPESIVSVARWYLLQHLHAKEDHELIDVLIENAKAHGDVRTLELYEQLST
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattgaagagtgctagagaagcaatacgaaataaa
gaatataaggaagccttaaaacattgcaaggctgtcttgaagcaagaaaaaaacaactac
aatgcctgggtcttcattggcctggcagctgcagagttggagcagcctgatcaggccaaa
gcagcatacaagaaggcaactgagcttgaaccaaaccagctactggcatggcagggatta
gcaaatatgtatgaaaaatccaagcaaacagacatcaaaggagacttagcagatgtgtac
cagaagctcttggaactctatgaaagtggtgacaagcagaaatggtatgatgtgtgtaac
aagctagtggaactttatcatcaagaaaagaaatatgcagaggtggctgaaacatggcag
aaactgatacaaatgaagcagggggaaggtgcagaaaaggcagagctgcatcagctgtgg
aagaagatgatcaagttgctgaaagacagcacgcagagccgggataatagggctgagcag
tcgcttctgactgctttcgagcatgcagtgaactctgctgacactgttcctggtgaggac
caccagaatctctacaaggactttatccagtgcttgtcaaattttcctcatgaagcagct
aggttggaacaggcctgtaatgacatgatggctttgtatcctactgtgagttacccttta
gaagtactttgcttgcactttgttcagtcaggtactttgtcagaagaagccttcgattgc
ttttctaggcttttggagatggatgcaagcagtggtccagccatcattggattgggtgtc
aaattcctccaagaaaagaaatataaggaggctgttaagagtcttactgaaggtttgcag
ctgaccagccagtgtgcaggagcctggcattatttggcagaggcacagatgaaaattcac
aagcacagggatgctgtcctgtcctgcaatcgagctcttaaggcacttggaactcctggg
ggtcctacccttcggctgaagaaccttatccttaggttgaaagcagaggctttgattaaa
attgctgatgctgatgctgcagaagaagccattaaatcacttgagcaggtcgaggatgca
agcaatgatccagtggttttagctctcagaggtcaggcttatctaaacaaaggcttcaca
gatcaggctgcacagatttcacaagagctgctgttgtcccaccctgatctggctgagtct
catgctctccagggtttcatccattattcccaaaagagctatgaacaggctgaaagaagt
tttctaaatgctattgaaagaaagcctgaaactgcagagtatcatcagtatctggggctc
acatattggttcatgagtgatgagacaaaaagggacaaaggaaaagcacacactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagacattgctggagataaaggtagagctcgtggttgctatagaaaggcctttgat
ctggatgaaacccatgaagaatctggagaagcagttgtagacttaagcatggaacttgga
gacatggacactgctctgtcaatcctgaataaggtgactgaaaacgcgaccgctggcaca
gccaagtgggcctggcttcatcgtgggctttactacctgaggactgatcagccttcacaa
gcagtggctgatttgcaggcagctctgagggctgatccaaaggatgccaactgctgggag
tctctaggggaggcttacttgggcagaggtagctacacaacagctctaaaatccttcagg
agagcaactgagctgaacccagagctcgtgtacagcatttacaaagctgcagaagttgag
cagattctgggcaaatatgaaaatgctatagccacctatcaagaaatcttaaagaagaca
gaagactatgtgcctgcactgaaaggacttggtgaatgccatctcatgctggcaagatca
gcccttgataacttctatgataggagggctctggattacatagagcaggctcttgagttt
ttcacaagggctgcaaagcatcgtcctgatgtgtcttgcctctggaagctgctgggagat
acctgtaccagtgtgcatgttctttcaccagccaaagtgaacattgaagttctgggattc
cttctgggtaaaaatgtagaaaaacagatgctgaagaaacatgagctgctcgcactggga
ggaaggtgttacagcagagctttaaagctgatgccattgcccagcatatggtgtgatctt
ggaataagttattatcgacaggcagagcatctcagagcagtgggcactgacatgaatgag
accagtgagctgctgcagaagtctttagagtgtgtgaaaaaagctgtgaggcttgacagc
aaaaatcatcttttttggaatgctcttggtgtagttgcttcctgcaagggtattgagaat
tatgctcttgctcaacattcattcatcaagtcaattcaagctgaggaaaataattttgtt
gcctggaccaacttgggggttttgtatctggcaactgacaacattgagcaagctcatgaa
gccttcaagatagcccaatctctggagcctacttacttactgtgctggcttgggcaggct
tttattgcagagaaggtgggcagctatgatacaatggatctcttcaggcatacaactgag
ctcaggatgcataatgagggagcaaaaggctatgcccactgggtatgttcaacactgcag
gataaaagcaacagaaacactgagctgtatcagtacaacattgttcaaatgaatgctgtt
ccagcagcccacgtggtcctgggaaaatacacagaaagaaatccagatgatgcctctgct
ttcacaatgctgggttatttgaatgagaacctccatcttaaaaggcaggcagcagatgcc
tatgagagggcagcttcattgctgaaagactctggggatactgagcaatacaatacagca
atgcagaactatggcaggtcactgtgtgcccttggtcagtgtgataaggccattgaggtt
tacacatcaatacctctgactgattttgatggcatcatggggatagccttagcttacttc
aaaaaaggactcttagaggaaagcaccaaagcctatgaaaaagccttgtcaatagctgag
tctgaagaagataaagcacacatcatgactgccttggccctgatagaatacaaacaggac
agagtggatgctgcaaagacactgctgtttaagtgctcattaaaggaacctacagtggaa
agcctgaagactctgtgcacactggggctggtgaagcaggaccctacacttgcagcagca
gccctgaaagaattgctgaagcatgaaaaagggcatgatgacatctatgagaggtgcctt
tttacctctgctctttatgcactgcaagacagaaatgtggccatccagagagaagtctcc
aaagccatacacagtaaccctggtaatcctgacctctggtctctgctctctcgactggtt
ccactctatgcaccacacaaggcaaaagggggagctgtggcaggaagcgttgcccaggtc
cttgacgtaaaccagggaaaggaagtcctgatgaatattgcagttaaccagttggcagca
ggatgtcacatgttagaagatgagaagaacaatcctttgaaaaatattcagaaggcaatc
cacctctgtccagataatcctgctgcctgggcagtgctgatggctgcctgccatgctgaa
aacactgtggcctgtctaagcaacagtcagccaaagagaacaggtctggagatgacactg
gtatctacagtttcagccaaaactgaagaaaataaccttccacgtaattatatccagact
cttgaagattggtgcctgtgtcaagctattaccagtctagaggagactggtaagctctca
gaagctgaagctctctgcaccaagggtttaaaaagctgccccgagcacccaggtctgttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagac
agcgtcctggaggagcttcacaagacagtcatgaccagttccagttcagttgcagcctgg
cagtggctggccaacgtgtataagtctcaaaggatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcatcccagcagggcagctggagtgggaagttatccagtctg
ctcaggctagccatgctggccctggaaatctgcatggctaatgcctcaaatgaccactgg
acatccttggtgcaggaggcaacagctgaagctttgaagctttctccttgccccgtggca
tctctcctgcaagcactgctacagtacagctgcaaaatgggagcaagggagactcgtaga
atgctggagagagtggtgtatcaaccagggaatccagaatccatcgtgtccgtggcacgc
tggtacctcctgcagcacctgcatgccaaagaggatcatgaattaatagatgtgcttata
gaaaatgccaaagctcatggggatgttagaactctggaactatatgagcaactgtccaca
agtgcctaa
DBGET
integrated database retrieval system
