KEGG   Heliangelus exortis (tourmaline sunangel): 139799964
Entry
139799964         CDS       T12045                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
hek  Heliangelus exortis (tourmaline sunangel)
Pathway
hek03030  DNA replication
hek03410  Base excision repair
hek03420  Nucleotide excision repair
hek03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hek00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139799964 (RFC4)
   03410 Base excision repair
    139799964 (RFC4)
   03420 Nucleotide excision repair
    139799964 (RFC4)
   03430 Mismatch repair
    139799964 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hek03032]
    139799964 (RFC4)
   03036 Chromosome and associated proteins [BR:hek03036]
    139799964 (RFC4)
   03400 DNA repair and recombination proteins [BR:hek03400]
    139799964 (RFC4)
DNA replication proteins [BR:hek03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    139799964 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    139799964 (RFC4)
Chromosome and associated proteins [BR:hek03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    139799964 (RFC4)
DNA repair and recombination proteins [BR:hek03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     139799964 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    139799964 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 AAA_lid_RFC1 AAA_16 AAA_22 AAA_30 AAA_11 DUF815 Mg_chelatase AAA_14 SLFN-g3_helicase AAA_19 RuvB_N AAA_24 AAA_28 AAA_5 TIP49_C DNAX_ATPase_lid AAA_7 ResIII
Other DBs
NCBI-GeneID: 139799964
NCBI-ProteinID: XP_071608677
LinkDB
Position
9:complement(17921654..17934422)
AA seq 362 aa
MQAFLKGPSSISTKPPAAKEKGAAGSSGEGKKLKPIPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELCRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKEHVKISSEAVSYLVKVSEGDLRKAI
TFLQSATRLMGGKEITEKIVTEIAGVIPKETTDELLSVCQSGSFEKLETLAKNLINEGYA
VAQLVNQLHDIVVESSNFSDKQKSVIVEKLAEVDKCLADGADEYLQLVSLCSVVMQQLTQ
NT
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggctttcctcaaaggcccgtcttccatcagcaccaagccccctgctgccaaggaa
aaaggcgcagctgggagcagcggggagggcaagaagctcaaacccatcccctgggtggaa
aaatatcgccctaaaaacgtggatgaagttgccttccaggatgaagttgttgctgtgctg
aaaaagtccttggaaggtgctgatcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccactattttagcagctgctagagagctctatgggcctgaattatgccga
caaagagtccttgagttaaatgcttctgatgagcgtggaatacaagtgattcgggaaaaa
gtgaaggcttttgctcagttaactgcatctggaagccgttcagatggtaaaccttgtcct
ccttttaaaattgtaatcctggatgaagcagactcaatgacttctgcagcccaggcagcc
ttaagacgcacgatggaaaaagaatctaaaacaacacgtttctgccttatttgtaactac
atcagcagaataattgaacctttaacatctcgatgctccaaattccgcttcaagcctttg
tcagataaaatccaacagcagagactactggatgtttctgagaaggaacatgtgaaaatc
agtagtgaggcagtatcttaccttgttaaagtgtcagaaggggacttaaggaaagcaatt
acttttctgcaaagtgcaactcgcctgatgggtgggaaggagatcacagagaagatagtc
actgaaattgccggggtcatccctaaagaaacaactgatgaactgctctctgtctgccag
agtggttccttcgagaaactggaaacactggcaaagaatctcataaatgaagggtatgct
gttgcccagctggtaaaccagctgcatgatattgttgttgagagcagcaatttcagtgac
aagcagaaatctgtcatagtggagaaacttgcggaagtagacaaatgcttggcagatggt
gctgatgaatacttgcagttggtgagtctctgttccgtcgtgatgcagcagctcactcag
aacacttaa

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