Halomonas elongata: HELO_1920
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Entry
HELO_1920 CDS
T01311
Name
(GenBank) RapZ family nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
hel
Halomonas elongata
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hel03019
]
HELO_1920
Messenger RNA biogenesis [BR:
hel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HELO_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
SKI
AAA_21
CoaE
ABC_tran
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CBV41804
UniProt:
E1V9H0
LinkDB
All DBs
Position
complement(1069441..1070364)
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AA seq
307 aa
AA seq
DB search
MQIVIISGRSGSGKSIALQALEDLGFYAIDNLPAMLLGSLAEELRDGQARKCIAVSIDAR
NLPHALQRFPTLLHELRDRGIECQVVYLTTDARILIERYSTTRRRHPLTRNNRMTLAEAI
EQEEASLADIRDLADLVIDTSRLSVHELRGRIADQLADRGQETLTLTIESFGFKRGVPLD
ADIVFDARCLPNPYWDPSLRDATGRDENVIAFLESYPMVEEMRQDILAWVERWLPRYQAS
QRSYLTVAVGCTGGQHRSVYLAERLAHDLASQQSGVRLRHRELGIHLSRLPPEAALEQDD
HDHEKES
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgtgatcatcagtggccgttcaggctcgggcaagtcgatcgccctgcaggcc
ctggaggatctcggcttctacgccatcgacaaccttccggccatgctgctcggctcgctg
gccgaagagttgcgtgatggccaggcacgcaagtgcatcgccgtcagcatcgatgcccgc
aacctgccgcatgccctgcagcgcttcccgaccctgctgcatgagctgcgcgaccgtggc
atcgaatgtcaggtggtctacctgaccaccgacgcgcgtatcctgatcgagcgctactcg
accacccggcgacgtcatccactgacccgcaacaaccggatgacgctggccgaagccatc
gagcaggaagaagcctccctggcggacattcgcgacctcgccgacctggtgatcgacacc
tcgcgactctcggtacatgaactgcgtggccgcatcgccgaccaactggccgaccgtggc
caggaaaccctgaccctgaccatcgaatccttcggcttcaagcgaggcgtgcccctcgac
gccgatatcgtcttcgacgcgcgctgcctgccgaatccctactgggatccctcgctgcgc
gacgccactggacgcgacgagaatgtcatcgcctttctcgaaagctacccgatggtcgag
gagatgcgtcaggacatccttgcctgggtggaacgctggctgccccgctaccaggccagc
cagcgcagctatctgaccgtggccgtcggctgtaccggcggccaacatcgttcggtctac
ctggccgagcgtcttgcccacgatctcgccagccagcaatccggcgttcggctgcgccac
cgagaactcggcatccacctcagccgcctccccccggaagcggccctcgaacaagacgac
cacgaccacgaaaaggaatcctga
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