Halomonas elongata: HELO_1980
Help
Entry
HELO_1980 CDS
T01311
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hel
Halomonas elongata
Pathway
hel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HELO_1980 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hel02000
]
HELO_1980 (msbA)
Enzymes [BR:
hel01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HELO_1980 (msbA)
Transporters [BR:
hel02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HELO_1980 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
ABC_ATPase
DUF3584
DUF87
AAA_30
MMR_HSR1
AAA_25
AAA_21
RsgA_GTPase
nSTAND1
NB-ARC
AAA_24
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CBV41864
UniProt:
E1V9N0
LinkDB
All DBs
Position
1129283..1131028
Genome browser
AA seq
581 aa
AA seq
DB search
MIEHSGWTLYKRLLGYVRPHWRAFSLAIVGYVLYAASSTALAEMMKRLIDGIQDPDAAFR
LWLPLFVVGMFAFRGLGTFLGTYFMSNVARNLVHALRCDVFNHMLHLPGRFFDSHSSGHL
ISRVTYHVEQVTGAATKAITILLREGLFVIGLIIYLLWTNWMLTLLFLAVTPMIGGVVSY
ASKRFRSISRRIQRSMGDVTHVASEALSGYRVVRTHGAEAYEKARFAEASEVNRRQSMKE
ALTKATSTPVIQLMVALALALLVWLAMSPALMANMTPGEFVAFITAASLMAKPVRQLTEI
NATVQKGIAAAAELFGLLEEEPEEDLGDREPGRLEGRVRFEDVHFAYGEDQPEVLKGIDL
EVAPGEMIAIVGRSGSGKSTLMSLLPRFYHPTAGRILIDDVPIETYRLAPLRRCIALVSQ
QVMLFNASIADNIAYGVDHADPAAIEAAARAAHAHEFIENLSEGYDTVVGENGVMLSGGQ
RQRLAIARAIFKDAPLLVLDEATSALDTESERYIQAALEEVCRDRTTFVIAHRLSTIERA
DRILVMEAGEIVEQGNHAELLARDGAYAALHRLQFRESEPA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaacattccggctggaccctctacaagcgtctgctgggttacgtcaggccgcac
tggcgggccttctccctggccatcgtgggctatgtgctctatgccgcatcgagcacggcg
ctggccgagatgatgaagcggctgatcgacggcatccaggatcctgacgccgcctttcgg
ctctggctgcccctgttcgtggtaggcatgttcgccttccgggggctgggcaccttcctc
ggcacctatttcatgagcaatgtggcgcgcaacctggtgcatgccctgcgctgtgatgtc
ttcaatcacatgctgcacctgcccgggcgcttcttcgactcgcattcctcggggcatctg
atctcgcgggtcacctaccatgtggagcaggtgaccggtgcggccaccaaggcgatcacc
atcctgctgcgcgaaggcctcttcgtgatcgggctgatcatctacctgttgtggacaaac
tggatgctgacgctgctgtttctcgccgtgacgccgatgatcggcggcgtggtcagttac
gccagcaagcgctttcgtagcatctcgcggcgcatccagcgctccatgggcgatgtgacc
catgtggcatccgaagcgctgtccggttaccgggtggtacgcacccacggcgccgaggcc
tacgagaaggcacgcttcgccgaggccagcgaggtcaaccgtcgccagagcatgaaggaa
gccctcaccaaggccaccagcacgccggtgatccagttgatggtggctctggctctggca
ttgctggtgtggctggccatgtcgccggcgttgatggcgaacatgacgcccggcgagttt
gtggccttcatcaccgccgcttcgctgatggccaagccggtacgccagctcaccgagatc
aacgccaccgtgcagaagggaatcgccgcggccgccgagctgttcggcctgctcgaggag
gaacccgaagaggatctgggcgatcgagaaccggggcgtctcgagggccgggtgcgcttc
gaggatgtgcatttcgcctatggcgaggatcaacccgaggtgctcaagggcatcgatctg
gaagtggcgccgggcgagatgattgccatcgtcggccgctcgggcagcggcaagtcgacc
ctgatgagcctgctgccgcgcttctaccatcccacggcgggacgtatcctgatcgacgat
gtgcccatcgagacataccgcctggcgccgttgcggcgttgcatcgccctggtctcccag
caggtcatgctgttcaacgcgagcatcgccgacaacatcgcctatggagtggatcacgcc
gatccggccgccatcgaggccgctgcccgtgccgcccatgcccacgagttcatcgagaac
ctgtcggagggctatgacaccgtggtgggagagaatggcgtcatgctttcgggtggccag
cgccaacgcctggccatcgcccgggccatcttcaaggatgcgccgttgctggtgctggac
gaggccacctcggcgctggataccgaatcggaacgctacatccaggcggccctggaagag
gtgtgtcgtgatcgcaccaccttcgtgattgctcatcgcctgtcgaccatcgagcgtgcc
gatcgcatcctggtgatggaggccggcgagatcgtcgagcagggcaatcacgccgagctg
ctggcccgggacggcgcctatgcggccctgcatcgcctgcagttccgggagagcgagccg
gcatga
DBGET
integrated database retrieval system
