Halomonas elongata: HELO_2006
Help
Entry
HELO_2006 CDS
T01311
Name
(GenBank) UvrD/REP-type helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hel
Halomonas elongata
Pathway
hel03420
Nucleotide excision repair
hel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HELO_2006
03430 Mismatch repair
HELO_2006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hel03400
]
HELO_2006
Enzymes [BR:
hel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HELO_2006
DNA repair and recombination proteins [BR:
hel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HELO_2006
MMR (mismatch excision repair)
Other MMR factors
HELO_2006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CBV41890
UniProt:
E1V9Q6
LinkDB
All DBs
Position
1156792..1158990
Genome browser
AA seq
732 aa
AA seq
DB search
MRLTPEQRAVVAHDGGHARVAAVAGAGKTTTLVARVLRLLERGVDPTRLLVLMFNRSARE
DFQTRLTAMAPAGQRLPDVRTFHSLGHRLSQSLTRWGVLAPRQLLTADWQLERLLRQASL
NALEGAPEARETALDADKLEALAHFCGLVKAEMAEPAELYARLDFGDGTEHFVGAFEQAE
TLLAEHGLMTYADLIYRPLRALEADAGLRDRVQGFLDHVIIDEYQDINVAQQRLLAVLAG
RQAAVMAVGDANQCIYEWRGAHPDTMLENFTATFGAAHDYPLSTTFRHGHALALVANHAI
DANRRRPDQICLAAPDNPATQLAVNQGSQALLDELAAWQRQGRNLSEACLLVRSWALSVP
LQLALLRAGIPFRLAREDRFVFRLPLVEALAGYLMLARDASLLQDPGHLLTLLSQPTPFV
PRERLSALAARLAETQRWPERHDPLLEGIKPHQRRTLKRRWALLCELPKRSSWSPARLLG
HVIEEVEAEKVLKRAAARRDKGEEDVRLLDVLIEQAGEVSDLAAFTDLLRRPVENRDDGV
LINTVHGAKGLEWPLVMLAGTNEEDFPHYTRDNPLTPQRLEEERRLFYVAITRARERLVM
LHDGGEHRPSRFLGETAWQDGQRVAQRLAGSQETTPVAVARPDLVRRYLSALSPETPIEL
PVEAAETPGVAERAADYRVGQRLNHAVFGEGEISVVEGDPANPVIEVRFLQAGRRRLIAS
RAPIELLEGEHA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgacgccggaacagcgcgccgtcgtggcgcatgatggaggccatgcccgggtc
gcagcggtagccggtgccggcaagaccaccaccctggtcgcccgggtgctgagactgctc
gagcgaggcgtcgacccgacacgcctgctggtgttgatgttcaaccgctccgcccgcgaa
gacttccagacgcggctcacggccatggcgccggcggggcagcggttgcccgacgtgcga
acctttcactctctgggacatcgcctcagccagagcctgacccgctggggcgtgctggcg
ccacgccagttgctgacagccgactggcagctcgaacgcctgttgcgccaggcgtcgctg
aatgccctggaaggggcgcccgaggcgcgcgagaccgccctcgacgccgacaagctggaa
gccctggcgcacttctgcgggctggtcaaggcggaaatggccgagcccgccgagctctat
gcacggctcgatttcggcgatggcaccgagcacttcgtgggcgccttcgagcaggccgag
accctgctcgccgagcatggcctgatgacctacgccgacctgatctaccgcccgctgcgg
gccctggaggccgacgccggtctgcgcgatcgggtgcagggctttctcgatcacgtcatc
atcgacgaatatcaggacatcaatgtcgcccagcagcgcctgctggccgtactggcgggt
cgccaggcggcagtgatggcggtgggggatgccaaccagtgcatctatgaatggcgcggt
gcccatcccgacaccatgctcgagaacttcaccgcgaccttcggcgccgcccacgattac
ccgctctcgacgaccttccggcatggccatgccctggcgctggtggccaatcatgccatc
gacgccaaccggcgccgccccgaccagatctgcctggccgcgcccgacaatccggccacg
caactggcggtgaatcagggcagtcaggcactgctcgacgaactcgccgcctggcaacgc
cagggccgaaacctctcggaggcctgtctgctggtgcgtagctgggcgctgtcggtgccg
ctgcaactggcgctgctgcgcgccggaattcccttccggctggctcgggaggatcgcttc
gtgttccgcctgccgttggtcgaggcgttggcgggctatctgatgctggcccgggacgct
tccctgctgcaggaccccggccatctgctgacgttgttgtcccagccgacgcccttcgtg
ccccgcgagcgtctatcggcactggcggcgcgcctggccgagacccaacgctggcccgag
cgtcacgatccgttgctggaaggcatcaagccccatcagcggcgtaccctcaagcgtcgc
tgggctctgctgtgcgaactgcccaaacgctcgagctggtcgccggcccgcctgctcggc
catgtgatcgaagaggtggaggcggagaaggtgctcaagcgggccgccgcgcgtcgcgac
aagggcgaggaagacgtgcgcctgctggatgtgctcatcgagcaggccggcgaggtgagc
gacctggcagccttcaccgacctgttgcgtcggccggtggagaaccgcgacgatggtgtg
ctgatcaacacggtgcacggtgccaaggggcttgagtggccgctggtgatgctggctggc
accaacgaggaagattttccccactatactcgggacaacccgctgacgccccagcggctc
gaggaagaacgtcggcttttctatgtcgccattacccgtgcccgggagcgtctggtgatg
ctgcacgatggcggcgagcaccggcccagccgttttctcggcgaaaccgcctggcaggat
ggccagcgcgtggcgcaacgccttgcggggtcacaagagactacccccgtcgcggtagcg
cgccccgacctggtgcgccgttatctgtcggccctgtcgcccgagacgccgattgaactg
cctgtcgaggcagccgaaacgccgggggttgccgagcgcgctgccgactatcgggtcggc
cagcggttgaatcacgctgtattcggcgaaggcgagatcagcgtggtggagggcgatccg
gccaatccggtgatcgaagtccgtttcctgcaggctggccggcgacgcctgatcgccagc
cgagcgcccatcgaattgctggaaggagagcacgcatga
DBGET
integrated database retrieval system
