Halomonas elongata: HELO_2451
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Entry
HELO_2451 CDS
T01311
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hel
Halomonas elongata
Pathway
hel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HELO_2451 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hel03019
]
HELO_2451 (rhlE)
Enzymes [BR:
hel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HELO_2451 (rhlE)
Messenger RNA biogenesis [BR:
hel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HELO_2451 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_30
P-loop_SecA
AAA_22
HI1480
Motif
Other DBs
NCBI-ProteinID:
CBV42335
UniProt:
E1VC65
LinkDB
All DBs
Position
complement(1682598..1683899)
Genome browser
AA seq
433 aa
AA seq
DB search
MSFSDLGLRAELLSAIEAQGYTEPTPIQRQAIPAVLEGGDLLASAQTGTGKTAGFTLPML
QRLADGKRPAKRGVRALVLTPTRELAAQVGESVRDYGRHLSLTSHVIFGGVGQQPQVDAI
RPGLDILVATPGRLLDLQQQGHVDLSGVETLVLDEADRMLDMGFIHDIRKVLKLLPAKRQ
NLLFSATFSNEIQTLANQLLDRPTLIEVARRNTTAETVEQAVYRVDREKKRDLLAHLIQS
QRWFQVLVFTRTKHGANRLAEHLGKRDIPAMAIHGNKSQSARTKALSAFKSGDLQVLVAT
DIAARGLDIDELPHVVNFELPNVAEDYVHRIGRTGRAGNEGQAVSLVCVDEHGLLKNIEK
LIKRDLVKHIEPGFEPDPNAKPEPIENGRGGRGRGRGGNGGGNRNAGGNNTANRDAPTGR
KRRRRGGQKREQA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttccgacctaggcctgcgggccgaactcctgagcgctatcgaggcccagggc
tataccgagccgaccccgatccagcgccaggccattcccgccgttctcgagggcggcgac
ctgctggccagcgcccagaccggtaccggcaagaccgccggcttcaccctgccgatgctc
cagcgcctggccgacggcaagcgccccgccaagcgcggcgtgcgtgccctggtgctgacc
cccacgcgcgaactcgccgcccaggtcggtgaaagcgtgcgcgactacggccggcacctg
tcgctgacatcgcacgtcatcttcggcggtgtcggccagcagccccaggtggatgccatc
cgccctggactggacatcctggtggccacgccggggcgcctgctcgacctgcaacaacaa
ggccacgtcgatctctccggcgtcgagaccctggtgctggacgaagccgaccgcatgctc
gacatgggcttcatccacgacatccgcaaggtcctcaagctgctgcccgccaagcgccag
aacctgctgttctcggcgaccttctccaacgagatccagacgctggccaaccagttgctc
gaccggccgaccctgatcgaggtggcacggcgcaacaccaccgccgaaaccgtcgagcag
gccgtctaccgggtcgaccgcgagaagaagcgcgacctgctggcgcacctgatccaatcg
cagcgctggttccaggtgctggtcttcacccgcaccaagcacggggccaaccgcctggcc
gagcatctcggcaagcgtgacatccctgccatggcgatccacggcaacaagagccagtcg
gcccgcaccaaggcattgtcggccttcaagtccggcgacctgcaggtcctggtggccacc
gacatcgccgcccgcggactcgacatcgacgaactgccgcacgtggtcaacttcgagctg
cccaacgtcgccgaggactacgtccaccgcatcggccgcaccggacgcgccggcaacgaa
ggtcaggccgtgtcgctggtctgcgtcgacgagcacggcctgctcaagaacatcgagaaa
ctgatcaagcgcgacctggtcaagcacatcgagccgggcttcgaaccggaccccaacgcc
aagccggagccgatcgagaacggccgtggcgggcgcggccgcggtcgaggcggtaacggc
ggtggcaaccgcaacgctggcggtaacaacaccgccaatcgcgatgcccccaccggtcga
aagcgccggcggcgcggcggccagaagcgagagcaggcctga
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