Halomonas elongata: HELO_2875
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Entry
HELO_2875 CDS
T01311
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hel
Halomonas elongata
Pathway
hel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HELO_2875 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hel03019
]
HELO_2875 (groEL)
03110 Chaperones and folding catalysts [BR:
hel03110
]
HELO_2875 (groEL)
03029 Mitochondrial biogenesis [BR:
hel03029
]
HELO_2875 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hel04147
]
HELO_2875 (groEL)
Enzymes [BR:
hel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HELO_2875 (groEL)
Messenger RNA biogenesis [BR:
hel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HELO_2875 (groEL)
Chaperones and folding catalysts [BR:
hel03110
]
Heat shock proteins
HSP60 / Chaperonin
HELO_2875 (groEL)
Mitochondrial biogenesis [BR:
hel03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HELO_2875 (groEL)
Exosome [BR:
hel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HELO_2875 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
HELO_2875 (groEL)
Exosomal proteins of breast cancer cells
HELO_2875 (groEL)
Exosomal proteins of colorectal cancer cells
HELO_2875 (groEL)
Exosomal proteins of bladder cancer cells
HELO_2875 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
CBV42759
UniProt:
E1V3T0
LinkDB
All DBs
Position
2189003..2190649
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKQVKFSSDARTRMAKGVDTLANAVKATLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVTEGLKGVIAGMNPMDLKRGI
DQAVDAAVKEIGALSVPCTDSSAIAQVGTISANGDKRIGQIIADAMEKVGKEGVITVDEG
RGFDDELDVVEGMQFDRGYLSPYFVTNQDTMAVELEDPFILLVDKKVSNIRELLPTLEAV
AKAGKPLVIIAEDIEGEALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLDLEQTTLDHLGTAKRVTMSKENTTIIDGAGQDSDIEARVSQIRAQIEETSSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGTALI
RVLTKIADLKGENEDQTHGIAIAVRAMEAPLRQIVTNAGQEASVILNRVKDGEGNFGYNA
QTGEFGDLFEMGVLDPAKVTRSAVQSAGSIAGLMITTECMIADDPDEQESGGGDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaacaagtcaagttctccagtgatgcacgcactcgcatggccaagggtgtc
gataccctggccaatgccgtcaaggcgaccctgggcccgaaaggccgcaacgtggtgctg
gaaaagtccttcggcgcgccgaccgtgaccaaggacggcgtctccgtggccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcccagatggtcaaggaagtcgcttccaag
acttctgatgttgctggcgacggcaccaccaccgccaccgtgctggcccagtccatcgtc
accgaaggcctgaagggcgtcatcgctggcatgaacccgatggacctgaagcgtggcatc
gaccaggccgtcgacgccgccgtcaaggaaatcggcgcgctgtccgtgccgtgcaccgac
tccagcgccatcgcccaggtcggcaccatctccgccaacggcgacaagcgcatcggccag
atcatcgccgacgccatggagaaggtcggcaaggaaggcgtcatcaccgtcgacgaaggt
cgcggcttcgatgacgagctggatgtcgtggaaggtatgcagttcgaccgcggctacctc
tcgccgtacttcgtgaccaaccaggacaccatggccgtggaactggaagacccgttcatc
ctgctggtggacaagaaggtctccaacatccgcgaactgctgccgactctggaagccgtc
gccaaggccggcaagccgctggtcatcatcgccgaggacatcgagggcgaagccctggca
accctggtggtgaacaacatgcgtggcatcgtcaaggtcgccgccgccaaggcgcccggc
ttcggtgatcgtcgcaaggccatgctccaggacatcgccatcctcaccggtggcaccgtg
atttccgaggaagtgggtctggacctcgagcagaccactctggaccacctgggtaccgcc
aagcgcgtgaccatgtccaaggaaaacaccaccatcatcgatggtgctggccaggacagt
gacatcgaggctcgcgtcagccagatccgcgcccagatcgaagagacttcctccgactac
gatcgcgagaagctccaggagcgcgtcgccaagctggccggcggtgtggccgtgatccgc
gtcggtgccgccaccgaagtggagatgaaggagaagaaggcccgcgtcgaagacgccctg
cactccacccgcgccgctgtcgaggaaggcgtggtgcccggcggtggtaccgccctgatc
cgtgtgctgaccaagatcgccgacctcaagggcgagaacgaggaccagacccacggcatc
gccatcgccgtgcgcgccatggaagccccgctgcgtcagatcgtcaccaacgccggtcag
gaagcttccgtgatcctgaaccgcgtcaaggacggtgaaggcaacttcggctacaacgcc
cagaccggcgagttcggcgacctgttcgaaatgggtgtgctggacccggccaaggtcact
cgcagcgccgtgcagtccgctggttccatcgccggcctgatgatcaccaccgagtgcatg
atcgccgacgatccggacgagcaggagtccggtggcggcgacatgggtggcatgggcggt
atgggaggcatgggcggcatgatgtaa
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