Halomonas elongata: HELO_2892
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Entry
HELO_2892 CDS
T01311
Name
(GenBank) GAF/sigma-54-interact/HTH domain transcription regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
hel
Halomonas elongata
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hel03000
]
HELO_2892
Transcription factors [BR:
hel03000
]
Prokaryotic type
Helix-turn-helix
Other families
HELO_2892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
AAA_16
AAA
GAF
AAA_2
GAF_2
DUF3426
AAA_22
DUF815
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CBV42776
UniProt:
E1V3U7
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Position
complement(2208163..2209716)
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AA seq
517 aa
AA seq
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MTEFLKALRTLLARLSEGEASDMYWANLLRALVGDFPADASTLMVMDGDALRPVALLGLD
DEVRGRHFALQDHPRLAAIASHPGVCRFPHDSPLPDPFDGLIDEDLSEVHDCLGVALRDD
DRLIGLLTLDALEPGRLDGLDDEQLLSIARLLGTCLCLAERLRTTRTRLNEALAQDRPTE
VNWRWNSRAMRQLDDAIDLVAPTDMSVLLHGETGVGKELAVRALHRRSRRHQGPLVQVNC
AALSESLIESELFGHRRGAFSGATEDRRGHFEMADGGTLMLDEIGELPLALQPKLLRVLQ
EGEIQPLGCETPRKVDVRVIAVTNRDLNAEADAGRFRADLYHRLSAFPLYVPPLRERPED
IPLLVGHFLEINRVRLGLNNLRLEAEAEAALLAWHWPGNVRELEHTLARAALRALGERDT
PTGNDRRQSVALITREHLDLPNEAGRTLAEGAGDALADAERPGEPSLPLKEATEAFQRRH
IQASLSEHDGNWAATARSLGMDPGNLHRLARRLGLKA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatttctcaaggcactgcgaactctcctggctcggctgtcggagggagaggcc
tccgatatgtactgggccaacctgctgcgggccctggtgggggatttccccgccgatgcc
agcaccttgatggtgatggacggggacgccttgcgtccggtggcgttgctgggcctcgat
gacgaggtccgcggacggcacttcgccttgcaggaccatccccggctcgcggcgatcgcc
agccatcccggcgtatgccggtttcctcatgacagcccgctgccggaccccttcgatggc
ttgatcgacgaggacctcagcgaggttcacgattgtctcggcgttgcgctgcgcgacgat
gaccgcctgatcggactattgacgctggacgcgctcgagcccgggcgtctggacggcctc
gatgacgagcaactgttgagcattgcgcggttgctggggacttgcctgtgcctggccgag
cgcttgcgaaccacgcgtacccgtctcaacgaggccctggcccaggatcggcccaccgag
gtcaactggcgctggaacagccgcgccatgcgtcagctcgacgatgccatcgacctggtg
gcgcccaccgacatgagcgtgcttctgcacggggaaacgggggttggcaaggaactggcg
gtacgcgccctgcatcgtcgttcgcgtcggcatcaagggccattggtgcaggtcaattgc
gccgccttgtcggagagcctgatcgaaagcgagttgttcggccatcggcgaggtgccttc
tcgggggcgaccgaggatcgacgcgggcatttcgagatggcggatggcggcaccctgatg
ctcgacgagatcggtgagttgcccctggcgcttcagcccaagctgctgcgcgtcctgcag
gaaggggagattcagccgctgggttgcgagacgccgcgcaaggtcgatgtgcgggtcatc
gcggtcaccaaccgcgatctcaatgccgaagccgacgccggccgattccgtgcggatctc
tatcatcggctgagtgccttccccctgtatgtgccgcccttgcgcgaacgacccgaggat
atcccgctgctggtcggccatttcctcgagatcaacagggttcgcctgggactcaacaat
ctgcggctggaggcggaagccgaagcggcgctgctggcctggcattggccgggcaatgtc
cgcgagctcgaacacaccctggcccgggcggcgttgcgcgccctgggggagcgagatact
ccgactggcaacgatcgccgtcagtcggtggccctgatcacacgcgagcatctcgacctg
cctaacgaggctggaaggacgctggccgagggggcaggggatgcgttggccgatgccgag
cgccccggtgaaccgtcattgccgctgaaggaggcgaccgaggcgttccagcggcgccac
atccaggccagcttgagcgagcacgatggcaattgggcggcgacggcccggtcactgggc
atggatccgggcaatctgcaccgcttggcccgacgcctgggcctgaaggcatga
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