Halomonas elongata: HELO_3186
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Entry
HELO_3186 CDS
T01311
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hel
Halomonas elongata
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hel03400
]
HELO_3186 (sbcC)
DNA repair and recombination proteins [BR:
hel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HELO_3186 (sbcC)
Archaeal homologous recombinant proteins
HELO_3186 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
nSTAND3
T4_deiodinase
AAA_22
RsgA_GTPase
cobW
Motif
Other DBs
NCBI-ProteinID:
CBV43070
UniProt:
E1V5B5
LinkDB
All DBs
Position
2564790..2568104
Genome browser
AA seq
1104 aa
AA seq
DB search
MKILALRLANLASLPGPLELDFATEPLASAGLFAITGPTGAGKSTLLDALCLALYGNTPR
LRQAPNRDSQVDDPSGQALTTSDPRTLLRRGTASGHAEVDFVGRDGHRYRARWAVRRARD
KADGRLQGADQSLRDLDDDRLLTTQKREFERLLPERLGLTFEQFTRAVLLAQSEFAAFLK
ADDNERSDLLERLTGTAEYSAISRAAYRRASEARKGVETLEAKLADDLPAETEARAALEQ
QAETARQALADLQQQQARLDDRQRWHDTDTRLREALIEGQRQHKDAEADWQALADARADR
QWRRLILPQRHRLERQAALPDEIATLDARHHETLKALEAAEATHHQASQTHTETEQALNA
AQEARRQAEPALREAREQAQQLAGIEQQLKRDEATQAERQRQGTELDSQYRNARAAHDER
RRQRDAWQATLAQLMGDHQHLEDARQAAQQLLDRAARRRLALDELTSRWQQVSHAAEAHR
RLTEQRHDDERRLASLLEQGQSARRQLDEKHSHYISVAAVIERSRAVRSESVAMLREGLQ
ENEPCPVCGGLDHPWRHQPPPTPEAAQLAAQQQEEDRQLSEAQEERDRAQQQRDHLVGEY
RALEAALKQRQQDARAAEQQLDEARQALHEHPLHAELAAIDETRRDAWLAEQRADSETRR
AHHQQVLDDLTRAETELAPLDKALQQDELVLARLGTQQEALDKELAELAERLPPLQAQRD
DLARRLQARLGEHASPDAWQQHLDNRQAQAHQARDTALSQLHDARQEVQRLTQQRDHERQ
RLDALLRERDSLDGELAEWRRAHPELDDATLARLLDQSDDEVKRQEQQLDAAERTLQQAD
AALAERRQALLAHRRDQALGTDDATDEDDTPLLGDSIETRIRERRAALASEREALAPALE
AAQQHRDETQHALRDDDRKRARQQQGQAELETARAEYRRWGRISELIGSADGKTFRRIAQ
AYNLEQLLEHANAHLTGLSRRYCLVRGGSELGLLVVDRDMGDERRSVHSLSGGETFLVSL
ALALGLASMASGELTIESLFIDEGFGSLDPESLALAMEALDGLQALGRRVGVISHVQEMH
ERIPVQIHVAPIGNGTSRARLVSG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccctgcgactcgccaacctggcctcgctgcccggcccgctggagctc
gacttcgctaccgagccgctggcctcggccggcctgttcgccatcaccggacccaccggc
gccggcaagagcaccctgctcgatgccctgtgcctggcgctctacggcaacacgccacgc
ctgcgccaggctcccaaccgtgacagccaggtcgacgatccctcgggccaggctctcacc
accagcgacccgcgcaccctgctgcgccggggcaccgccagcggccatgccgaggtcgac
ttcgtcggccgcgacggtcaccgctaccgtgcccgctgggcggtgcgtcgcgcccgcgac
aaggccgacggccgcctgcaaggcgccgatcagtcgctgcgcgatctcgacgacgaccgc
ctgctgaccacccagaagcgcgaattcgagcgcctgctgcccgagcgcctgggcctgacc
ttcgagcaattcacccgcgccgtgctgctcgcgcaaagcgagttcgccgccttcctcaag
gccgacgacaacgaacgcagcgacctgctggagcgcctgaccggcaccgccgagtactcg
gcgatctcacgcgccgcctaccgccgggccagcgaggccagaaaaggcgtcgagacgctc
gaggccaagctcgccgacgacctgcccgccgagacggaggcccgcgcggcgctcgagcaa
caggccgagaccgcccgtcaggccctggccgacctccagcaacagcaagcccggctggac
gaccgccaacgctggcacgacaccgacactcgcttgcgcgaggcactcatcgaaggccag
cgacagcacaaggatgccgaggccgactggcaggcgctggccgatgcccgcgccgaccga
cagtggcgccgcttgatcctgccgcagcgtcaccgcctcgagcgccaggccgccctgccc
gacgagatcgccacgctggacgcccgccaccacgagaccctcaaggccctcgaggcggcg
gaagcgacacaccaccaggccagccagactcatactgaaaccgagcaagcgctcaatgca
gcccaggaagcgcgtcgtcaggccgagccggcgctgcgcgaggcccgggaacaggcccag
cagctcgccggcatcgagcagcaactcaagcgagacgaggcaacccaggccgaacgccaa
aggcaaggcaccgagctcgacagccagtaccggaacgccagggccgcacatgacgagcgc
cgccggcaacgcgacgcctggcaggcaacgctcgcgcagttgatgggcgatcaccagcac
ctggaagatgcccgtcaggccgcccagcagcttctcgaccgggccgcccgacgccgcctg
gccctggacgagttgaccagccgctggcaacaggtcagccacgccgccgaggcgcatcga
cgactgaccgaacagcgacacgacgacgaacgccgcctggcgagcctgctggaacagggc
caaagcgcccgccgacagctcgacgaaaagcacagccactacatcagcgtcgccgccgtc
atcgaacgcagtcgcgccgtgcgcagcgaaagcgtggcgatgctgcgcgagggcctgcaa
gagaacgaaccctgccccgtctgcggcggcctcgatcatccctggcgccatcaaccgccg
ccgacgccggaagccgcacaactggccgcccagcaacaggaggaagaccgccagttgagc
gaagcgcaggaagaacgtgaccgggcacaacagcaacgcgaccatctggtcggcgaatat
cgcgccctcgaggctgccctcaagcagcgccagcaagacgctcgcgcggccgagcaacag
ctcgacgaggcgcgccaggccctgcacgaacatccccttcatgcggaactcgcggccatc
gacgagacccggcgcgacgcctggctggcagagcaacgcgctgacagcgaaacccgccgg
gcgcatcaccaacaggtgctggacgacctgaccagggccgaaaccgaactggcgcctctc
gacaaggcgttgcagcaggacgaactcgtcctcgcccgcctcgggacccagcaagaagcg
ctcgacaaggaactggccgagctggccgaacggctgccgccgctacaggcgcaacgcgac
gacctcgcgcgtcgactccaggcccgtctcggcgaacacgcctcgccggacgcctggcag
caacacctcgacaatcggcaggcccaggctcatcaagcccgcgataccgcgctgagtcaa
ttgcatgacgccaggcaggaagtgcaacgcctcacccagcagcgcgaccatgaacgccag
cgcctcgacgccttgctccgggagcgtgacagcctggacggcgagttggctgaatggcgt
cgggcccaccccgaactggacgacgccaccctcgcccgcttgctggatcaatccgacgac
gaggtgaagcgccaggagcaacaactggacgccgccgagcgaacgctccagcaggccgac
gccgccctcgccgagcgccgccaggcactgctcgcccaccgccgcgaccaggcgctgggc
acggacgacgcaaccgatgaagacgacacgcccctgctgggcgacagcatcgagacaagg
attcgcgaacgacgcgcggcgctggccagcgaacgtgaggccctcgcccccgctctggag
gccgcccagcagcatcgcgacgagacccagcatgccctgcgcgacgacgaccgcaagcga
gcacgccagcagcaaggtcaggccgaactggaaacggcccgcgccgaatatcgccgctgg
ggacggatcagcgagttgatcggctccgccgacggcaagacattccgacgcatcgcccag
gcctacaacctcgaacagttgctggaacacgccaatgcgcacctgaccggcctcagccga
cgctattgcctggtgcgcggcggcagcgaactcggcctgctggtcgtcgaccgcgacatg
ggcgacgaacgccgctcggtccactccctctccggcggcgagaccttcctggtctcgctg
gccctcgccctggggctggcctcgatggcctccggcgagctgaccatcgaatcgctgttc
attgacgaaggcttcggcagcctcgatcccgaatccctggccctggccatggaagcgctg
gacggccttcaagccctgggccggcgcgtcggcgtgatctcccacgtccaggaaatgcac
gaacgcatcccggtgcagattcacgtcgcccccatcggcaacggcaccagtcgcgccagg
ctggtcagcggatga
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integrated database retrieval system
