Halomonas elongata: HELO_3335
Help
Entry
HELO_3335 CDS
T01311
Name
(GenBank) probable decarboxylase (homolog to diaminopimelate decarboxylase)
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hel
Halomonas elongata
Pathway
hel00300
Lysine biosynthesis
hel00470
D-Amino acid metabolism
hel01100
Metabolic pathways
hel01110
Biosynthesis of secondary metabolites
hel01120
Microbial metabolism in diverse environments
hel01230
Biosynthesis of amino acids
Module
hel_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HELO_3335
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HELO_3335
Enzymes [BR:
hel01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HELO_3335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Ecm33
Motif
Other DBs
NCBI-ProteinID:
CBV43219
UniProt:
E1V649
LinkDB
All DBs
Position
complement(2755964..2757226)
Genome browser
AA seq
420 aa
AA seq
DB search
MAEHFGIPEHIRDAIEAYRQACHDPMAAFFYDLPALAAQGSAMKAALPPGVELYYAIKAN
SEAAIIDTLAPVVDGLELSSGGEIERACACSTPRPWVLSGPGKLDSDMRAAMTRGVEAFH
VESLGEVARLQTIAASLDRVQPVLVRINPSLPEDLSSRLRMAGTATPFGIDEAQLADAVR
AVDDAPNLALVGFHVHAMSHQKCERRHQRLLASYLERWPRWRALARHPEQVIQLNVGGGI
GVNYLQPSEQFDWPGLCRALEQRLAAMHEPPLVRFEIGRFLSAFCGYYAIEVIDTKVSHG
EGFLVCRGGTHQFRLPAAQGHDHPVIHLPRTPRRALGGESRPWTVVGQLCTPKDVLSRRQ
ELQGVEAGDLLVLPLAGAYGYNISHADFLCHPRPDQVFVRESRESSVPETGGHRRAEPVD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcacttcgggatccccgaacacatccgcgacgccatcgaggcgtatcggcag
gcgtgccacgatcccatggcggcgttcttctatgacctgccggcgcttgcggcgcaggga
agcgccatgaaggcggcattgccgccgggcgtcgagctttactatgcgatcaaggccaac
agcgaggcggccatcatcgatacgctggcgcctgtggtggatgggctcgagctgtcgtcc
ggcggcgagatcgaacgtgcctgcgcctgttcgacgccgcgcccctgggtgctctccgga
ccgggcaagctcgattccgacatgcgtgcggccatgacgcgaggggtcgaggcctttcat
gtcgaaagtctcggcgaagtggctcggctgcagacgatcgcggcatccctggatcgcgtg
cagcccgtgctcgtgcgcatcaacccctcgcttcccgaggatctctccagtcgtctgaga
atggccggcaccgccacgcctttcggtatcgatgaggcccagttggccgacgccgtgcgg
gcggtggatgacgctccgaacctggcgctcgtcggcttccacgtgcatgccatgtcgcac
cagaaatgcgagcggcggcaccagcggctcctggcgtcctatctggagcgctggccccgg
tggcgagcgctggcccgtcatcccgagcaggtgatccagctcaatgtggggggcggtatc
ggcgtgaactacctccagccgtccgagcagttcgattggcctggcctgtgccgggccctg
gagcaacgtctggcggccatgcacgagcccccgctggtgcgcttcgagatcgggcgtttc
ctctcggccttctgtggctactacgcgattgaggtgatcgataccaaagtcagccatggg
gaaggctttctcgtctgccggggcggcactcaccagtttcgcctgcccgcggcccagggg
cacgaccacccggtcattcacctgccacgcacccctcggcgggcgctcggaggtgagagc
cgaccctggaccgtagtggggcagctgtgtaccccgaaggatgtgttgagtcgccggcag
gagctgcaaggggtcgaggcgggagacctgctggtgctgccgctggccggtgcctatggc
tacaacatttctcacgcggacttcctgtgccacccacgccccgatcaggtcttcgttcgc
gaaagtcgcgagagcagcgtccccgaaacgggaggtcaccggcgcgccgagccggtggac
tga
DBGET
integrated database retrieval system
