Halomonas elongata: HELO_3904
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Entry
HELO_3904 CDS
T01311
Name
(GenBank) helicase domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hel
Halomonas elongata
Pathway
hel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HELO_3904
09124 Replication and repair
03420 Nucleotide excision repair
HELO_3904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hel03021
]
HELO_3904
03036 Chromosome and associated proteins [BR:
hel03036
]
HELO_3904
03400 DNA repair and recombination proteins [BR:
hel03400
]
HELO_3904
Enzymes [BR:
hel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HELO_3904
Transcription machinery [BR:
hel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HELO_3904
Chromosome and associated proteins [BR:
hel03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HELO_3904
DNA repair and recombination proteins [BR:
hel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HELO_3904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
CBV43788
UniProt:
E1V9B6
LinkDB
All DBs
Position
complement(3408838..3411102)
Genome browser
AA seq
754 aa
AA seq
DB search
MTTCDGYRVAVRALCEFTAREGDLDHRFTPAPSAREGIEGHARVVARRGDAYRPEVAVSG
RVEGLIVGGRADGFDPHQRRVEEIKTHRGDLSRMGDNQRALHWAQVSAYGALLCEAEELT
RVTLALVYLDVVTGTETVLTREAEAGELLDFLAELCRRFRAWAECEAKHRERRDTALAGL
SFPHDDFRPGQRGLAEDVYRAAASGRCLLAEAPTGIGKTLGALYPSLMAMPRRHIDRLAF
LTMKTPGRRLALDALSTLGAEARDETRLPLRVLELVARDKACEHPDRACHGESCPLARGF
YDRLPEARQAAVERGWLDRDALRELALEHGVCPYYLGQELARWCDVLVGDVNHYFDDGAL
LHGLARADDWRLALLVDEAHNLVERARGMYSAGLSQKRLNRLHREAPPALQRPLGRLVRR
WRDLLRDMPETEWQALAAVPDGWLGALQGSVAAIGDYLAEHPDGGDPALRDFLFEALAFA
RLAERFGDHSLCELRRNGRGQAELGIRNLVPADFLAPRFAAAHSTVLFSATLSPPEYHRD
LLGLPADSVVRRVASPFDAAQLEVRCRTDISTRLKDREASLAPIVDEMAGQYRRWPGHYL
AFFSSFAYLESARARLEAEYPEVPVRAQRRGMSEAEREAFLADFAPGGSGIAFAVLGGAF
AEGIDLPGERLVGAFVVTLGLPPFDPINEALKQRLQARFGRGDDYAYRVPGMIKVVQAAG
RVIRGPGDRGVVVLMDDRFARRENRALLPDWWQV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtgcgacggttaccgggtggcggtacgtgccctgtgcgagttcaccgcccgg
gaaggcgatctggatcatcgtttcacgcccgcgcccagcgcccgcgagggcatcgagggg
cacgcccgggtggtcgcccggcgcggcgatgcgtatcggcccgaggtggcggtgtcgggc
cgggtggagggcctgatcgtcggcggacgtgccgatggcttcgatccgcatcagcggcgc
gtcgaggagatcaagacccatcgtggcgatctctcgcgcatgggcgacaaccagcgcgcc
ctgcactgggcgcaggtctcggcctatggcgccttgctgtgcgaggccgaagaactgacg
cgggtgacgctggcgctggtctatctggatgtcgtcaccggcaccgagacggtgttgacc
cgggaggccgaggccggcgaacttctcgacttcctggcggaactgtgtcggcgtttccgg
gcctgggcggagtgcgaggcgaagcaccgcgagcggcgcgacacggcactcgccggactt
tcctttccccacgacgattttcggcccgggcagcgcgggctcgccgaggacgtctaccgg
gccgcggcgagcggtcgttgcctgttggctgaggcgcccaccggcatcggcaagacgctg
ggggcgctgtatcccagcctgatggccatgccgcgtcgtcacatcgaccggctggccttt
ctgaccatgaagacgccggggcggcggctggcactggatgccctgtcgacgctcggcgcc
gaggcccgagacgagacgcgcctgccgttgcgggtgctggaactggtggctcgcgacaag
gcctgcgagcatccggatcgagcctgccacggcgagtcctgtccgttggcccgcggtttc
tatgatcgactgcccgaggcacgccaggccgcggtcgagcgtggctggctggatcgtgac
gcgctgcgcgaactggcgctggagcatggcgtctgtccctattatctgggccaggaactc
gcgcgctggtgcgatgtgctggtcggcgacgtcaatcactacttcgacgacggcgccttg
ctgcacggactcgcccgcgccgatgactggcggctggcgttgctggtggacgaggcccac
aacctggtggagcgggcgcggggcatgtacagcgccggcctgtcccagaagcggctcaat
cggttgcatcgcgaggcgccaccggcactgcaacgccccctggggcgattggtacgtcgc
tggcgggatctgctgcgcgacatgccggagaccgaatggcaggccctggcggcggtgccc
gacggctggctcggtgccctgcagggaagcgtcgcggcgatcggcgactatctggccgaa
caccccgatggcggcgatccggccctgcgtgacttcctgttcgaggcgctggccttcgcc
cggttggcggagcgctttggcgatcattccctctgcgaactgcggcgtaatggccgtggt
caggcggagctgggcattcgcaatctggtgccggcggatttcctggcgccgcgtttcgct
gcggcacactcgacggtgctgttctccgcgaccctgagcccgcccgagtatcatcgcgac
ctgctggggttaccggccgacagcgtggtacgccgggtcgcctcgcccttcgacgccgca
caactggaagtgcgctgtcgcaccgatatctcgacccgcctcaaggatcgcgaggcctcc
ctggcgccgatcgtcgacgagatggccgggcagtaccgccgatggccgggacactatctg
gccttcttcagcagcttcgcctacctcgagtcggcccgggcgcggctcgaagccgagtat
ccggaggtgccggtgagggcccagcggcgcggcatgagcgaggcggagcgcgaggcattt
ctggccgacttcgctcccggcggcagcggcatcgccttcgcggtgctcggcggggccttc
gccgaaggcatcgacctgccgggcgaacggctggtgggagccttcgtcgtcaccctgggg
ctgccgcctttcgacccgatcaacgaggcgctcaagcagcggcttcaggcccgtttcggg
cgtggcgacgattacgcctaccgggtgccggggatgatcaaggtggtgcaggccgccgga
cgggtgattcgcggccccggcgaccggggcgtggtggtactgatggacgaccgcttcgcg
cggcgggaaaatcgggcgttgttaccggattggtggcaggtctag
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