Halomonas elongata: HELO_4133
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Entry
HELO_4133 CDS
T01311
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hel
Halomonas elongata
Pathway
hel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HELO_4133 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hel03019
]
HELO_4133 (pnp)
03016 Transfer RNA biogenesis [BR:
hel03016
]
HELO_4133 (pnp)
Enzymes [BR:
hel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HELO_4133 (pnp)
Messenger RNA biogenesis [BR:
hel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HELO_4133 (pnp)
Transfer RNA biogenesis [BR:
hel03016
]
Prokaryotic type
tRNA degradation factors
HELO_4133 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
CBV44017
UniProt:
E1VAR8
LinkDB
All DBs
Position
complement(3682001..3684133)
Genome browser
AA seq
710 aa
AA seq
DB search
MNPVKKTFEYGRSTVTLETGRIARQASGAVMVTMDDTVVLCTVVAKKDVNPSQPFFPLSV
HYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVICTVLSTD
RNHDPDIAAMIGTSAALAISGVPFNGPIGAARVGFTEEHGYFLNPSVEELASSELNMVVA
GTEKAVLMVESEANELLEDEMLGAVLYGHQEMQVAINAIQELAAEAGKPRWDWQAPAENT
ALKDAMASGFEAKVGEAYRITDKMQRQDALAALKDEAVEQLAGEEDGKFDADEVKGAFAS
LEKRVVRSRVVKGEPRIDGRDLKTVRPLDIEVGSLPKTHGSAIFTRGETQAVVVATLGTL
RDAQLIESLEGERKDRFLLHYNFPPYCVGEAGFMGGPKRREIGHGRLARRGVEAMLPSED
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPMKAPVAGIAMGLVKDEDGFAVLT
DILGDEDHLGDMDFKVAGSAEGVTALQMDIKIEGINEEIMEQALQQAHEARLHILEQMNT
VIGQSREEVSENAPSMATIKIDPEKIRDVIGKGGAMIRKICEDTGASIDLDDDGTVRIYA
EEKSAAKAAIDTVLAITAVPEIGKLYRGKVVRIADFGAFVNIIPGTDGLVHISQIVPERV
NDVRDYLNEGDEPIVKVLDIDNRNRVKLTIKEITPEEKAAFEAEAADAEL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtcaagaaaacatttgaatacggtcgcagtaccgtcaccctggaaaccggg
cgtatcgcccgccaggcctccggtgccgtgatggtcaccatggacgacaccgtggtgctg
tgcaccgtggtggcgaagaaggacgtcaatccctcccagcccttcttcccgctctccgtc
cattaccaggagaagacctacgcggtcggcaagattcccggcggcttcttcaagcgcgag
gggcgtcccaccgagaaggaaactctcacctcgcgcctcatcgatcgcccgattcgcccg
ctgttccccaaggggttcatgaacgaggtccaggtcatctgcacggtgctctccaccgat
cgcaaccatgacccggatatcgccgccatgatcggtacgtccgcggccctggcgatttcc
ggtgtgcccttcaacggtcccatcggcgcggctcgtgtcggcttcaccgaggaacacggt
tacttcctcaacccgtccgtcgaggaactggccagttccgagctcaacatggtggtggcc
ggcaccgagaaggccgtgctgatggtcgagtccgaagccaacgagctgctcgaggacgag
atgctgggtgcggtgctctatggccaccaggaaatgcaggtggcgatcaacgccatccag
gaactcgccgccgaggccggcaagccgcgctgggactggcaggctcccgccgagaacacg
gcgctcaaggacgccatggccagcggcttcgaagccaaggtcggcgaggcgtatcgcatc
accgacaagatgcagcgtcaggatgccctggccgccctgaaggacgaggcggtggagcaa
ctggccggcgaagaggacggaaagttcgatgccgacgaggtcaagggcgctttcgccagc
ctcgagaagcgcgtggtgcgcagtcgcgtggtcaagggcgagccgcgtatcgatggccgc
gacctgaagaccgtgcgccccctggatatcgaagtcggcagcctgcccaagacgcatggc
tcggcgatcttcacccgtggcgagacccaggccgtcgtggtggcgacgctggggaccctg
cgtgatgcccagttgatcgaatcgctggaaggggagcgcaaggatcgcttcctgctgcac
tataacttcccgccctactgcgtgggcgaggccggtttcatgggtggtcccaagcgtcgc
gagatcggccatggccgcctggcacgccggggcgtggaggccatgttgccttccgaggac
gagttcccctacaccatccgggtggtttccgagatcaccgaatccaacggctccagctcg
atggcctcggtgtgcggctcctcgctggccctgatggacgccggcgtgccgatgaaagcg
ccggtggcgggcatcgccatgggcctggtcaaggatgaagacggcttcgccgtgctcacc
gatatcctgggcgacgaggaccacctcggcgacatggacttcaaggtggccggtagcgcg
gaaggcgtgaccgccctgcagatggacatcaagatcgagggcatcaacgaggagatcatg
gagcaggcgctgcagcaggcccatgaagcccgtctgcacatcctcgagcagatgaacacg
gtgatcggccagagtcgtgaggaagtctccgagaacgcgccgtcgatggccaccatcaag
atcgacccggagaagatccgtgatgtcatcggcaagggtggcgccatgatccgcaagatc
tgcgaggataccggcgcttccattgacctggatgacgacggcaccgtacgcatctatgcc
gaggagaagtcggcggccaaggcggccatcgacaccgtactggccatcaccgccgtgccc
gagatcggcaagctgtatcgcggcaaggtagtgcgcatcgccgacttcggtgccttcgtc
aatatcatccccggcaccgatggcctggtgcacatctcgcagatcgtgcccgagcgggtc
aacgacgtgcgcgattacctgaacgaaggtgacgagccgatcgtcaaggtgctcgacatc
gacaatcgcaaccgggtgaagctcaccatcaaggagatcacccccgaagagaaggcggcc
ttcgaagccgaagcggccgacgccgagctgtaa
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