Halomonas elongata: HELO_4173
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Entry
HELO_4173 CDS
T01311
Name
(GenBank) uncharacterized protein
Organism
hel
Halomonas elongata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
Anticodon_2
DNA_ligase_IV
Motif
Other DBs
NCBI-ProteinID:
CBV44057
UniProt:
E1VAV8
LinkDB
All DBs
Position
complement(3726894..3734018)
Genome browser
AA seq
2374 aa
AA seq
DB search
MDKNFKTGLIITGNADGGVRAVRATSSEIRNLNRDFESGSKRARSYGHETRQTARELEFL
KQHALGVGTAIAGAFAANNLAQQAVMIRNTDALANSLQVNTKTLQEWQFAGRSVGLEADK
IGDIFKDVSDKLGDFAATGGGEAKDLFENLNLNIRELQALSPDKQILRIADAINEIEDPS
QRSFYFESLADEMVRLQPLLANGAQGLREASDMADALGIAMDDIEVRRAVEAAEAMDQLQ
GVAQGLSNTLIADLGPGLADSTRSLTEFIDEVGGADEVLEGIGQTITMLGSVYLAVRLRK
PLSKIGPLGLAAGRNIAQGFAMAVGASGRLNQALVVTQGRIAATAAAGRALRSSLALIGG
PAGAALLAAGGIYTFREELGLTIPRADASSEAVHQLTGKLNDLNKAAAEKKLTELNNRLA
DLKASAEETGQAYLEVGKNDTGHGGFLGADVSGQVEKIQEIGEGAKESRQEMANVEEAIG
LVRDRLEHLNSTGERTPPVLTNIGDASEDAAKKLEKQKEAAKSLLDELYPVLASQREYAE
QKELLTQYAEREGKSNQWLEESLSRLQNQYRNAGSAAEVYGFDGSKAMEKVEDSVDPMAT
AFERGIERMDDAAVDMWRSFLDGSEGAFDSFKNLALDTLAEVIHAYTTRQITTSIGAQIG
IGGQGASTAGGGGGFGNIASIGKQVYSGVVDGFSSVAWTGASNTAYAGGWAGSATSGIGQ
SGFMGGSLSNFGGSTGLMSLGASMIGSEVGDAVSGALTDKQANSNWGQMAGSAIGTYFGG
PIGAGLGSALGSVVDSLFGSGGSDLDLAMVRGRDESAHTWDHGIVAQGGLGAVGFQDEGS
HEVADLWDIDEAKQLVESIAQLDTAVASLAETPEQLAAMRDAVMASNRHGIQGHYGETSN
PGDVVDRLTSRYDDAFGALDAEFAEFMQGLDGSIDQVLEKGIAARQAFTFLSDASERLDL
RFNDTTASAYEAAASLAEAAGGVQNLSSLQQNYYQTLYSEEERLNQLRSDVTQQLNAMGM
SLPTSREGFRQLVEAQNLNTEAGRENYVQLMQLVDSFDRLRESASSVNDETTDLADKISG
LKDDVKSAWETFDKQSFDQRITLLEMAGKSEEALALQRERELATIDESLRPFQERIWALQ
DEAKAQEEAAQAGKEYAQALADAQSWLGSTLENITGWIDRNQSTDAGMGSPADQLAAAGE
AYREQLEAARGGDRTALQNITQYADRFIAAQKQWSASGGDTTSLIDRIERQLGTLPDQLS
AEEYIADEIKQALIEQTAGITSELADVLRSDTPSNIAGALASSFDDLTRGIGDVLTREQL
ATVMAGKATDAQLDAVMRVVDLNGDGVMSGLESVIIKSMPTDATLANALRQQLQANGDKA
LTAAQVRQALRPIASDKRINQLIRRVDTNGDGLLSAQELTSSRLGGLADGIAASLSGSFD
QLDANLDDNLTFDELKDGLSGMATDAQLKALMRSMDVNADGVISGLESVVIESMPTDSRL
ANVLRNQLKWTRNQQLTHDQVREALRPIASDESISQLIRRLDTNGDGIITAQEVGNARLG
GLADGIAASLSGSFDQLDANLDDNLTFAELKDGLSGMATDAQLKALMRSMDVNADGVISG
LESVVIESMPTDSRLANVLRNQFKWTRNQQLTADQVRDALKGKASNDRINQLIRRADKNA
DGIIDAAELASDVTTSELSSVLAKQLGWTRNQIKWTRNSQLTADQVRDALKGKASNERIN
QLIRRADKNADGIIDAAELASDVTTSELSGVLAKQLGWTRDQIKWTRNSQLTANQVRDAL
KGKASNDRINQMIRRADKNADGIIDATELASDASTSELSQVLSNQLKWTRNQIKWTRNSQ
LTHDQVREALSPIASNAEIDRLITRLDKNSDGIISAQEMASERLDGLASGIGNALSPMFD
TIDRSLDGLIDYDEFGKSFAGMASDEQLKRIFAQLDKNGDGTISRLEAMKGSTDEVGDNT
ASIEQQSLNQLEKLNNLVGEMTRTTDQFVDMNSTMVSLRDSINALGVAQEEQNRIERERR
EAKERQEKRLEKERAAASYLDRANQLEQQAQDKTLFDNLDGITAKRSDVIVGNIMDQAGN
DNILSWKEYQSALDDMKDRRDKGWYNAGELDFAKTAALSLRKQSRYHEMMDQAAGITGDD
YSGSIDRPDFAGVREELKGLSDIERARSFFTRYSDYAGSWKIWRGTLDYDWDRWTGNILT
TPIADADLIRVAKELDRDFAGPKRFFAKGGVFTNSVVDQPTMFNMGVMGEAGPEAVMPLA
NGPEGLGIRLYDTPPIPELPLLGRDDIAETLRDVLRENRQLRKDLNRLMGENNEHAAAGV
AVSQEGFKRVDRNTARIAETNDAIDDRQRLEAQR
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagaacttcaagacagggttgatcatcaccggtaacgccgatggtggtgtgcgt
gccgtgcgtgcgacctcgtcagaaatccgaaatctcaacagggattttgaatcgggttcc
aagcgtgcgcgctcttatggccatgagacccgtcaaaccgcccgtgagctcgagtttctg
aagcagcatgccctaggggtgggtaccgctattgccggtgcctttgctgctaataatctg
gcgcagcaagcggtgatgatccgtaatacggatgctctggctaactcgttgcaggtcaac
accaagacgctccaggaatggcagtttgccggtcgctctgtggggctcgaagccgacaag
atcggcgacatcttcaaggacgtcagcgataaactaggcgatttcgcggctacgggaggc
ggtgaagccaaagacctgttcgagaacctcaacctcaatatccgtgagctgcaggcactc
agtccggataagcagattctgcgcattgccgatgccatcaacgaaattgaggatcccagc
cagcggtccttctattttgagagcctggccgatgagatggttcgcctgcagccgctgctt
gccaatggagcgcagggtctgcgagaagcttctgacatggcagacgccttgggcatcgcc
atggatgatattgaggtacggcgtgctgttgaagccgccgaagccatggatcaactgcag
ggcgtggcccaagggctgtcgaacaccctgattgctgacctcgggcctggtctcgcggat
tctacccgtagcctgactgagttcatcgatgaggtgggtggggctgatgaggtgctcgaa
ggcatcggacagaccatcaccatgttgggcagtgtctacttggctgtccgcttgcgaaag
cctctatccaaaattggccccctgggactggcagcaggtcgcaatatcgcccaaggcttc
gccatggcggtcggagcgagcggccgcctgaatcaagcgctggttgtaacccaagggcgt
atcgcggccacggctgcggctggcagggcgcttcggagcagtctcgccctgatcggtggc
ccggctggagcggcgctactggcggctggtggtatctataccttccgtgaagagttgggc
ctgacgattcctcgagcggatgcttcttctgaagcggttcatcaattgactgggaagctc
aatgacctgaacaaggccgcagcagagaagaagctcaccgagctcaataatcgacttgct
gacctcaaagcctcagctgaggaaaccggacaggcttatctcgaagttggcaagaacgat
actggccatggtggttttcttggggccgatgtatcaggacaagttgaaaagatccaagag
attggtgaaggtgctaaggaatctcgccaagagatggcgaatgtcgaagaagccatcggc
ctcgtccgagatcgccttgaacacctcaactctacaggtgaaagaacaccgcccgtctta
accaatatcggcgacgcatccgaagatgcggcaaagaaactcgaaaaacaaaaggaagcc
gccaagtcgctcctggatgagctgtaccccgtcttggccagccagcgtgagtatgccgag
cagaaggagctgctgactcagtacgccgagcgcgagggtaagagcaaccagtggctagaa
gagtccctgagtcggctccagaaccagtaccgcaacgccggcagtgccgccgaggtgtac
ggcttcgatggcagcaaagccatggagaaggtcgaggactctgtcgatcccatggccacg
gcgttcgagcgtggcatcgagcgtatggacgatgccgccgtggacatgtggcggtcgttc
ctcgatggctccgaaggcgctttcgacagcttcaagaacctggcgctggatacgctggcc
gaggtcatccacgcctataccacgcggcagatcaccacctccatcggtgcccagatcggc
attggtggtcagggcgcatcaaccgctggtggcggtggtggtttcggcaacatcgcaagc
atcggcaagcaggtctacagcggagtcgttgacgggttcagcagcgtcgcgtggacgggg
gcgagcaatactgcctatgccggcggctgggcaggtagtgcgacgagcggcattggccag
tccggctttatgggcgggtccctgtccaatttcggcggctccactggcctgatgtcgctc
ggcgcctcaatgatcggcagtgaagtcggggatgctgtcagtggtgccctcacggacaag
caagccaactccaactgggggcagatggcgggttccgccatcggcacctacttcgggggg
ccgatcggcgccggccttggctcggccctcggctcggtggtggactccctgttcgggagt
ggtggcagtgacctcgacctcgctatggtccgtggtcgtgacgagagcgcccatacgtgg
gatcacggcatcgtcgcccagggtggactgggggctgttggcttccaggatgaggggtcg
catgaggtcgccgacctgtgggacatcgacgaggctaaacagctggtcgagagcatcgcg
caactggacaccgctgttgcatcactggcggagacgcccgagcagctggcggccatgcgc
gacgcggtgatggcatcgaaccgccatggcatccaggggcactatggcgagaccagcaat
cccggtgacgtcgtcgaccgcctgacctcccgctatgacgacgccttcggcgcgctcgac
gcggagttcgccgaattcatgcaggggctcgatggcagcatcgaccaggttctcgagaag
ggcatcgccgcccggcaggcgttcaccttcctcagcgacgcatccgagcgcctggatctg
cggttcaacgacacgacggcctcggcctatgaggcggcggcgtcactggccgaggcagcg
ggtggcgtccagaacctgtcgagcctgcagcagaactactatcagacgctgtacagcgaa
gaagagcgtctgaaccagctgcgctctgacgtaacgcagcagctcaacgccatgggcatg
tcgctgccgacttcccgcgagggcttccgacagcttgttgaggcgcagaacctcaacacc
gaagccgggcgcgagaactatgtgcagctgatgcagctcgtggatagcttcgatcgtctg
cgtgaatccgcctcgtcggtgaatgacgagaccaccgatctcgccgacaagatctccggt
ctcaaagacgacgtgaagtccgcttgggagacgttcgacaaacagtcattcgaccagcgc
atcacgttgctcgagatggccggcaagagcgaagaggccctggcactgcagcgcgagcgc
gaactggccaccatcgacgagtccctgcgtccgttccaggagcgcatctgggccctacag
gatgaggccaaggcgcaggaggaagcggcccaggccgggaaggaatatgcccaggccctc
gcggatgcccagtcctggctcggctcgacgctggagaacatcaccggttggatcgaccgc
aaccaatcgaccgacgcaggcatgggctcgccggccgatcagctggccgccgccggtgag
gcctatcgtgagcagctcgaggctgctcggggtggcgatcgcacggccttgcagaacatc
acgcagtatgccgaccgcttcatcgcggcacagaaacagtggtccgccagcggtggcgat
accacctcgctgatcgaccgcatcgagcgacagctcggcacgctgcccgatcagttgtcg
gccgaggaatacatcgccgacgagatcaagcaggcgctgatcgagcagaccgccggcatc
acgtctgaactggctgacgtactgcgcagcgacacgccgagcaacatcgccggggcactc
gctagctcgtttgacgatctgacgcgcggcatcggtgacgtgctgacccgtgagcagctc
gcgaccgtcatggccggcaaagcgacggacgctcagctcgatgccgtcatgcgcgtcgtc
gacctcaacggcgacggcgtcatgtccggcctggaatcggtcatcatcaaatcgatgccg
actgacgccacgctcgccaatgcgctacgccaacagctgcaggcgaacggtgacaaggcg
ctgaccgccgcacaggtgcgacaggcgctgcggcccatcgcctccgacaagcgcatcaac
cagctcatcagacgtgtcgacaccaacggcgatgggctgctgtcggcccaggagctgacc
agtagccggctcggtggcctggccgacggtatcgccgcttcgctgtccggctcgttcgac
cagttggatgccaacctcgacgacaacctgaccttcgatgagctcaaggatggcctgtcg
gggatggccaccgacgcccagctcaaggcgctgatgcgctcgatggacgtcaatgccgat
ggcgtgatcagcggcctcgagtcggtggtcatcgagagcatgccgaccgacagccggctg
gccaatgtgctgcgaaaccagctcaagtggacccgcaatcagcagctgacccatgaccag
gtgcgggaggcgctgcgtccgatcgccagcgacgagtcgatcagccagttgatccgtcgc
ctggacaccaacggtgacggcatcatcaccgcccaggaggtgggcaatgcccgcttgggt
ggcctggccgatggcattgcggcctcgctgtccggctcgtttgaccagttggatgccaac
ctcgatgacaacctgaccttcgccgagctcaaggatgggctgtcggggatggccaccgac
gcccagctcaaggcgctgatgcgctcgatggacgtcaacgccgatggggtgatcagcggc
ctcgagtcggtggtcatcgagagcatgccgaccgacagccggctggccaatgtgctgcgc
aaccagttcaagtggacgcgtaaccagcagctcactgccgaccaggtgcgcgatgccctg
aagggcaaggcgtcgaacgatcgcatcaaccagttgatccgtcgggccgacaagaatgcc
gacggcatcatcgatgccgccgagttggccagcgacgtcaccacctccgagctctcgtcg
gtgttggccaagcagctgggctggacgcgcaatcagatcaaatggacccgcaacagccaa
ctcactgccgatcaggtgcgtgatgctctgaagggcaaggcgtcgaacgagcgcatcaac
cagttgatccgtcgggccgacaagaacgccgacggcatcatcgatgccgccgagctggcc
agtgacgtcaccacttccgagctctccggagtgctggccaagcaactgggctggacgcgt
gaccagatcaagtggacccgcaacagtcagctcacggccaaccaggtgcgcgatgccctg
aagggcaaggcctcgaacgaccgcatcaaccagatgatccggcgggctgacaagaacgct
gacgggatcattgatgccaccgagctggccagcgatgccagcacgtcggagctgtcccag
gtcctgagcaaccagctgaaatggacccgcaaccagatcaagtggacgcgcaacagccaa
ctgacccacgaccaggtgcgtgaggcgttgtcgccgatcgcctccaatgccgagatcgac
cggctgatcacacgcctggacaagaacagcgacggcatcatcagcgcccaggagatggcc
agcgagcgcctggatggtctggcatccggcatcggcaatgcgctctcgccgatgttcgat
accatcgataggtcgctcgacgggctcatcgactatgacgagttcggcaagagctttgcc
ggcatggcctcggatgagcagctcaagcgaattttcgcgcagctcgacaagaatggcgac
ggcaccatctcgcggctggaggcgatgaagggctcgaccgacgaggtcggcgacaacacg
gcctcgatcgagcagcaatcgctgaatcagctcgagaagttgaacaacctggtcggggag
atgacccggaccacggatcagttcgtcgacatgaactcgacgatggtgagcctgcgggat
tccatcaatgccttgggggtggcgcaggaagagcagaatcgcatcgagcgcgagcggcgc
gaggcgaaggagcgtcaggagaagcgcctggagaaagagcgtgcggccgccagttacctg
gatcgggccaatcagctcgagcagcaggcccaggacaagacgctcttcgacaatctcgac
ggcatcaccgccaagcgctccgacgtgatcgtcggcaacatcatggatcaggcgggcaac
gacaacatcctgtcgtggaaggaataccagtccgcactcgatgacatgaaggaccgtcgt
gacaagggctggtacaacgccggcgagctcgatttcgccaagacggcggcgttgtcgctg
cgcaagcagtcgcgctaccacgagatgatggaccaggccgccgggatcaccggcgacgac
tactcggggagtatcgaccgtcccgacttcgctggcgttcgggaagagctgaaggggctc
tcggacatcgaacgcgcccgcagcttcttcacccgctattcggactatgccggcagctgg
aagatctggcgcggcacgctggattacgactgggatcgctggaccggcaacatcctgacc
acgccgattgccgatgccgatctgattcgcgtcgccaaggagctggaccgggacttcgcc
ggacccaagcgcttcttcgccaagggcggtgtgttcaccaactccgtcgtcgatcagccc
acgatgttcaacatgggcgtgatgggcgaggcgggccccgaggctgtcatgccactggct
aacggccccgagggtctgggtattcggttgtatgacacgcccccgatccccgaactgccg
ctgctgggtcgtgacgacatcgccgagacgctgcgggacgtgctgcgtgaaaaccgtcag
ctacgcaaggacctgaaccgtttgatgggtgagaacaacgagcacgccgccgcaggcgtt
gccgtctcccaggagggcttcaaacgggtggaccgcaacaccgcccgcattgccgagacc
aatgacgcgatcgacgaccgccagcgcctggaggcccagcgatga
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integrated database retrieval system