Halomonas elongata: HELO_4258
Help
Entry
HELO_4258 CDS
T01311
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hel
Halomonas elongata
Pathway
hel00300
Lysine biosynthesis
hel00470
D-Amino acid metabolism
hel01100
Metabolic pathways
hel01110
Biosynthesis of secondary metabolites
hel01120
Microbial metabolism in diverse environments
hel01230
Biosynthesis of amino acids
Module
hel_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HELO_4258 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HELO_4258 (lysA)
Enzymes [BR:
hel01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HELO_4258 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CBV44142
UniProt:
E1VBI5
LinkDB
All DBs
Position
3823992..3825281
Genome browser
AA seq
429 aa
AA seq
DB search
MDHFDYRDGVLHGEDVDLTSVAEAFGTPCYVYSKATLARHFRAYTEALGGHPHLICYAVK
ANANLAVLGLLARLGAGFDIVSVGELERVLVAGGDPAKVVFSGVAKQENEMARALEVGIK
CFNVESRAELERLDAVARGLGKVASVSLRVNPDVDAGTHPYISTGLKDNKFGIPVDEAFE
VYRQAAGMDNVRVAGLDCHIGSQLTELSPFLDALDRLLALLEQLRDAGIEVEHLDLGGGL
GVPYQDENPPQPFDYATSLLERLSRWPGSERLTLLFEPGRSIAANAGVLLTRVEFLKPGE
TKNFAIVDAAMNDLIRPALYQAWQAILPVDTRQPRETDTYDVVGPVCETGDFLGKQRRLA
IAAGDLLAVRSAGAYGFVMASNYNSRPRPPEVMVDGDRMHLVRRRERLEDLWAGETTLPD
DAMAGGDTS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttcgactatcgtgatggcgtcctgcacggcgaggatgtcgacctcaccagc
gtcgccgaggcgttcggcacgccctgctacgtctattccaaggctaccctggcgcgccac
tttcgcgcctacaccgaagcgctgggcggccatccgcatctgatctgctatgcggtcaag
gccaatgccaacctggccgtgctggggcttctggcacgcctcggcgccggcttcgacatc
gtctcggtgggcgagctggagcgcgtgctggttgccggcggcgaccccgccaaggtggtc
ttctccggcgtcgccaagcaggaaaacgagatggcccgggccctcgaggtcggcatcaag
tgcttcaacgtcgaatcccgcgccgagctggaacgcctcgatgccgtggcccgggggctc
ggcaaggtggcgtcggtgtcgctgcgcgtcaacccggatgtcgacgccggcacccacccc
tacatttccaccggcctgaaggacaacaagttcggcatcccggtggacgaggccttcgag
gtctaccgccaggccgccggcatggacaacgtgcgcgtcgccgggctggattgccatatc
ggctcccagctcaccgagctctcgcccttcctcgatgccctggatcgcctgctggccctg
ctcgagcaattgcgcgacgccggcatcgaggtcgagcatctcgacctgggcggcggcctg
ggcgttccctatcaggacgagaacccgccccagcccttcgactacgccacctcgctgctc
gagcgcctgtcgcgctggcccggcagcgagcggttgacgctgctgttcgagccggggcgc
tccatcgccgccaatgccggtgtgctgctgacccgggtggaatttctcaagcccggcgag
accaagaacttcgccatcgtcgatgccgccatgaacgacctgattcgcccggcgctatat
caggcctggcaggcaatcctgccggtggatacccggcagcctcgcgagaccgatacctac
gacgtggtcggcccggtctgcgagaccggcgacttcctcggcaagcagcgccggctcgcc
atcgccgccggcgacctgctggccgtgcgctctgccggcgcctacggtttcgtcatggcc
tcgaactacaacagccgcccgcgtcctccggaggtcatggtggacggtgatcgcatgcat
ctggtgcgtcgtcgcgagcgactcgaggatctctgggcgggcgagacgacgttgccggac
gacgccatggccgggggagatacgtcctga
DBGET
integrated database retrieval system