Halomonas elongata: HELO_4325
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Entry
HELO_4325 CDS
T01311
Symbol
trpI
Name
(GenBank) LysR family transcription regulator TrpI
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
hel
Halomonas elongata
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hel03000
]
HELO_4325 (trpI)
Transcription factors [BR:
hel03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HELO_4325 (trpI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_20
HTH_IclR
HTH_30
HTH_11
HTH_24
HTH_5
HTH_23
MarR
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
CBV44209
UniProt:
E1VBQ2
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All DBs
Position
complement(3894201..3895082)
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AA seq
293 aa
AA seq
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MSQSLPSLNALRAFNEVARTLSVTRAAEALNVTHGAVSRQIRQLEDQLGVRLFRREGRGL
ALTAEAEYLRASTSQAFEQLTHACGHLRRRATGAPVVLGCSGSFLARWFIPRLHRLKARY
PDLNLHLTADEGEKWPLGADVDAVMRFAEPPWPADAQVIELAPERIGPVMVPGLIEVAAP
DPGELLGLPLLHTESREQAWPRWFAAQGLDVTQVRRDQSFEHLNYMLEAALVGLGVAIAP
AYLVEEDLRAGRLVAPWGFIDTSARLGLWLPPGEPGREIERLIQWLRLELEAR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagtcactaccatcgctgaatgccctcagggccttcaatgaagtcgcccggaca
ctgagcgtgacgcgcgcggcagaggcgctcaatgtcacgcatggggcggtgagccggcag
attcgccaactcgaggatcagctcggggtgagactttttcggcgcgaaggacgagggctg
gcgctgacggcggaggcggaatatcttcgtgcgtcgacctcacaggccttcgagcagttg
acccatgcctgcggccacctgaggcgtcgcgcgacgggagcgcccgtcgtgctgggttgt
tcgggaagcttcctggcgcgctggttcattccgcgcctgcatcgcctgaaggcgcggtat
ccggacctgaacctgcatctgacggccgacgagggcgagaagtggccgctgggagccgat
gtcgacgccgtgatgcggtttgccgagccgccctggccggccgacgcccaggtgatcgag
ctggcgccggagcgcatcgggccggtcatggtgcccggcctgatcgaggtggcagcgccg
gaccccggcgagttgctggggttgccgctgttgcacaccgagtcccgggaacaggcatgg
ccacgctggttcgccgcccaggggctggatgtgacgcaggtgcgcagggaccaatcgttc
gagcatctcaactacatgctggaagcggccctggtgggattgggcgttgccatcgcgccg
gcctatctcgtggaggaggacctgcgggccgggcgtctcgtcgcaccctggggcttcatc
gacacctcggcccggctcggcctgtggctgccgccgggtgagccgggcagggagatcgag
cggttgatccaatggctccgcctcgaactggaagctcggtga
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