Helicobacter pylori UM298: K748_03635
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Entry
K748_03635 CDS
T02757
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hem
Helicobacter pylori UM298
Brite
KEGG Orthology (KO) [BR:
hem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hem03032
]
K748_03635
03400 DNA repair and recombination proteins [BR:
hem03400
]
K748_03635
Enzymes [BR:
hem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K748_03635
DNA replication proteins [BR:
hem03032
]
Prokaryotic type
DNA Topoisomerases
K748_03635
DNA repair and recombination proteins [BR:
hem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K748_03635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_LysW
DUF1272
Lar_restr_allev
DUF7575
Motif
Other DBs
NCBI-ProteinID:
AGR62526
LinkDB
All DBs
Position
459145..461355
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILN
ALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDRER
EIRAFKPLTYFTLDAYFESHLEAQLISYKGNKLKSQELIDKKEAQEIKNELEKESYTISS
IIKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVTTPQGVMGVITYMRT
DSLNIAKEALEEARNKIVKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIVLEPNALK
DYLKPEELKLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQHRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKY
IKQTENANDGSKQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNANEIIEG
VKCPECGGDIALKKSKKGSFYGCNNYPKCNFLSNHKPINKCCEKCHYLMSERIYRKKKAH
ECIQCKERVFLEEDDG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattatcgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagtcatcgcctctaaggggcatgttagggatttatccaaattcgct
ttaggcattaagattgatgaaacaggctttactcctaattatgtcgtggataaagatcat
aaagagcttgtcaaacagatcatagagctttctaaaaaggcatctaccacctacatcgct
accgatgaagacagagaaggggaagcgataggctatcatgtggcgtgcttgattgggggg
aaattagagagctatcctaggatcgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgacaaattgacatgtcaaaggtcaatgcccaacaagccagacgc
tttttggatcggatcgtggggtttaagctcagctcgttgatttcatcaaaaatcactaaa
ggtttgagtgctgggcgggtgcaaagcgcggctttaaagcttgtgattgatagggagagg
gagattagagcctttaagcctttaacctacttcacgctagacgcttattttgagtcgcat
ttagaagcgcaactcattagctataagggcaacaaactcaaatcccaagagcttattgac
aaaaaagaagctcaagagattaaaaacgaattagaaaaagaaagctacactatttctagt
attattaaaaaatctaaaaaatcccccacaccgccccctttcatgacttctactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttgtatgaaggtgtaaccaccccgcaaggggttatgggggtgatcacttacatgaggacc
gatagcttgaatatcgctaaagaagctttagaagaagcgaggaataagattgtaaaagac
tatggcaaagactacttaccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcagacccacctctattgttttagagccaaacgccttaaaa
gactaccttaagcctgaagaattaaagctctataccttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtagcttgcgaaaaaggc
gagtttaaagccagtggcagaaaactcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaacgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcgcgctattcagaagcgagcttgatt
aaagttttagaaagtttaggcataggcaggcccagcacctacgccccaacgatttccctc
ttacaacacagagactacatcaaggtagaaaaaaagcaaatcagcgctttagagagtgct
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaggagctagacaatatcgctcaaaataaagccgactatcagcaagtc
ttaaaggacttttactacccttttatggataaaattgaagctgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgcggtggggaattggtc
aaaaaaaatagccgttatggggagtttatcgcttgcaacaattaccctaaatgcaaatat
atcaaacaaactgaaaacgccaatgatggatccaagcaagaattgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggagcgtttttagcttgcaacaactaccct
gaatgcaaaaacaccaaatcgttaaaaaatacccctaacgcaaacgaaatcatagaaggc
gtgaaatgcccagaatgcgggggggatattgccttaaaaaagagcaagaaaggctcgttt
tatggttgtaacaattaccctaaatgcaattttttatccaaccataagcccatcaataag
tgctgtgaaaaatgccattatttgatgagcgaaagaatctatcgcaaaaaaaaggcgcat
gagtgcatccagtgcaaagagcgcgtgtttttagaggaagatgatggctaa
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