Helicobacter pylori UM298: K748_06715
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Entry
K748_06715 CDS
T02757
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hem
Helicobacter pylori UM298
Pathway
hem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K748_06715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hem03400
]
K748_06715
DNA repair and recombination proteins [BR:
hem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K748_06715
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K748_06715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Microtub_bd
DUF87
AAA_30
AAA_7
Kinesin
HAM1_N
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AGR62983
LinkDB
All DBs
Position
1043617..1045593
Genome browser
AA seq
658 aa
AA seq
DB search
MPLFDLKSPYPPAGDQPQAIETLTKSLKNNNHYQTLVGVTGSGKTYTMANIIANINKPTL
IMSHNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESYIPRRDLFIEKDSSINDDLER
LRLSAATSLLGYDDVIVIASVSANYGLGNPEEYLKVMEKIKVGEKRAYKSFLLKLVEMGY
SRNEVVFDRGSFRATGECVDIFPAYNDAEFIRIEFFGDEIERIAVFDALERNEIKRLDSV
MLYAASQFAVGSERLNLAIKSIEDELALRLKFFKKQDKMLEYNRLKQRTEHDLEMISATG
VCKGIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFGGMYAGDMSRK
SVLVEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNKLELELSKKNVAEQIIRPTGL
LDPKFEVRDSDKQVQDLFDEIKLVVARDERVLITTLTKKMAEELCKYYAEWGLKARYMHS
EIDAIERNHIIRSLRLKEFDILIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQT
MGRAARNANGKVLLYAKKITQSMQKAFEITSYRRAKQEEFNKLHHITPKTVTRALEEELK
LRDDEVKIAKALKKDKIPKSEREKIIKELDKKMRECAKNLDFEEAMRLRDEIAKLRTL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttgatttaaaaagcccttacccaccagcaggcgatcagccccaagccata
gaaaccttaacgaagagcttaaaaaataacaaccattatcaaactttagtgggggttaca
gggagcggtaaaacttatacgatggccaatatcatcgctaatatcaacaaacccactctg
atcatgagccataataagaccttatgcgcgcagctctatagtgaatttaaggcgtttttc
ccgcataatagggtggagtattttatctcccactttgactactaccagcctgaaagctat
atccctagaagggatttattcattgaaaaagacagctctattaatgatgatttagagcgt
ttgagattgagcgcggccacctcacttttaggttatgatgatgtgatcgtgatagcgagc
gtttcggctaattatggtttgggtaaccctgaagaatatttaaaagtcatggaaaaaatc
aaagtgggtgagaagcgtgcttataagagctttttattaaagctagtagaaatgggttat
agccgtaatgaagtggtgtttgatagggggagcttcagggcgaccggagaatgcgtggat
attttccccgcttataatgacgctgagtttattaggattgaattttttggcgatgagata
gaaaggattgctgtctttgacgctttagaaagaaatgaaatcaagcgcttggattctgtc
atgctttatgcggccagtcagtttgccgtagggagtgagaggttgaatttagccattaaa
agcattgaagatgaactcgctttaagattgaaattttttaaaaagcaggataaaatgctt
gaatacaaccgcctcaaacaacgcaccgagcatgatttagaaatgattagcgcaaccggt
gtgtgtaaaggcattgaaaattacgcgcgccattttacaggtaaagcccctaatgaaacg
cctttttgcttgtttgattatttagggatatttgagcgggagtttttagtcattgtggat
gaaagccatgtgagtttgccgcagtttggagggatgtatgcgggggatatgagcaggaaa
agcgttttagtggaatatggttttagattgcctagcgctttagacaaccgccctttaaaa
tttgatgaatttatccataaaaattgccagttcctttttgtttccgccacacccaataag
ctagaattagagctttctaaaaagaatgtcgctgagcaaatcattcgccctacagggctt
ttagaccctaaatttgaagtgcgagacagcgataagcaagtccaggatttatttgatgaa
atcaagttagtggtggctagagatgaaagggtgcttatcaccacgctcactaaaaaaatg
gcagaagaattgtgcaaatattatgccgaatggggcttgaaagcgcgttacatgcatagt
gaaattgatgcgattgaacgaaatcacatcatccgctctttaaggcttaaagaatttgac
attttaatagggatcaatcttttaagagaaggattggatttgcctgaagtctctttagta
gcgatcatggatgcggataaagaagggtttttgaggagtgaaacaagcctcattcaaacc
atggggcgagccgctagaaacgctaatggcaaggttttattatacgctaaaaaaatcact
caaagcatgcaaaaagcctttgaaattacgagctacaggcgcgctaagcaagaagagttt
aataagcttcatcatatcacccccaaaaccgttactcgcgctttagaagaggagttgaaa
ttaagagacgatgaggttaaaatcgctaaagccttaaaaaaggacaaaatccctaaaagt
gaaagggaaaaaatcattaaagaactggataaaaaaatgcgagaatgcgcgaaaaatttg
gattttgaggaagcgatgcgtttgagagatgaaatcgctaaattaagaacgctttaa
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