Helicobacter pylori UM298: K748_07610
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Entry
K748_07610 CDS
T02757
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hem
Helicobacter pylori UM298
Pathway
hem03420
Nucleotide excision repair
hem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K748_07610
03430 Mismatch repair
K748_07610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hem03400
]
K748_07610
Enzymes [BR:
hem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K748_07610
DNA repair and recombination proteins [BR:
hem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K748_07610
MMR (mismatch excision repair)
Other MMR factors
K748_07610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
Viral_helicase1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGR63108
LinkDB
All DBs
Position
complement(1225507..1227537)
Genome browser
AA seq
676 aa
AA seq
DB search
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
ALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSHKNPEHTPYAAFYENILDEFENTK
KKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNARVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEV
VKSGHFNKPALLNYNDNIVQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSYISDIGSNTAKDIHEALMLLG
NGDLKLALIQPDKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPK
ISLNGAKMLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFK
KLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaactttgcaattaaaccccgagcaactaaaagcggccaaggctttgaaaggg
tataatttagtgattgcgagcgctggcacaggaaagacttctacgattgtggggcgcatt
ttatacctgcttgataacggcatcaagcctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgattgcaagggtggctaaatattccaagttaagctccaaaatt
gaagcgggcactttccatgcggtagcgtatcgctatttaaaagagcattaccctaattta
agcctgaagcaacctaaagaattgaaaaaacttttagaaagcattgtggataccaaaaac
gcgctaacagatgacgataaaaaaccctacacttcgcagcatctctacgccctctattct
ctttataccaacgctctaaaacaagaagattttagcgcatggctttctcataaaaaccct
gaacacacgccatacgccgccttttatgaaaacattttagacgaatttgaaaacaccaaa
aaaaagcataattatattgactataacgacttactgctgttatttaaacaagcgatgcta
gaaagacctagcccttataaagaagtgctttgcgatgagtttcaagacactaacccctta
caagaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgcttttaatggggcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccgggttttcacgctcactaaaaactaccgctcttctaaagagatttta
gatctcgctaatcaagtgatacagcataatgagcgcatttaccctaaaaatttagaagtg
gtgaaatcagggcatttcaataagcctgcacttttaaattacaacgacaatatcgtgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaagaattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagccgctttaagatcccacaatgtgcca
agcaaaagaaaagggagcgcgagcttttttgaatccaaagaagtagcgttagcgttagac
atttgcgcgctcatctttaaccctaaagacatcatggcagcaatccatgttttaagttat
atcagcgatattggctctaacaccgctaaagacattcatgaagctttgatgcttttaggc
aatggcgatctcaaattggctttaattcagcctgataaagaagccaaaatttacacgaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgccctagaaaacagctca
aggtttaacagcgtgatagataaagcgtttcattcgcacccggtgttgatgcaccctaaa
atctcactcaatggggccaaaatgcttagcgattttttcattctttataccaaagcccct
acccattcccctagcgctttaatcaaacacattttagaaagcgcgttttttcaaaccttt
aaaacacgccttttaaaagagcgatccaaaaataaggacggctcttataacgagtttaaa
aaactccaagcacaaaaacgcttcaatgaaaaaatggatttgctgagttctttggcgaaa
aattaccaaaatttagggcgttttttaaacggcactttaataggctccagtgaagccacg
caaggcgagggcgtgaatttattgagcgtgcatgcttctaaaggcttagaatttaaagat
gtttatattatagatttaatggagggccgtttccctaaccacaaactcatgaataccggt
gggggcattgaagaagagcggcggcttttttatgtcgctatcacaagggctaaggaaaat
ttatggctttcttatgcgaaaaacgaattgagagaaaacgccaaacctaaagagcataaa
ccctcggtgtttttgtatgaagcggggcttttgaaacccgatttaaaataa
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