Helicobacter pylori UM298: K748_08050 Help Entry K748_08050        CDS       T02757                                  Name (GenBank) cytochrome C oxidase subunit II   KO K15842   cytotoxicity-associated immunodominant antigen Organism hem  Helicobacter pylori UM298 Module hem_M00564   Helicobacter pylori pathogenicity signature, cagA pathogenicity island SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CagA_N CagA Spectrin_Anc-1 FliT Motif Other DBs NCBI-ProteinID:  AGR63169 LinkDB All DBs Position 1322706..1326236 Genome browser AA seq 1176 aa AA seqDB search MTNETIDQTTTPDQTPNQTDFVPQRFINNLQVAFIKVDSAVASFDPDQKPIVDKNDRDNR QAFEKISQLREEYANKAIKNPAKKNQYFSDFINKSNDLINKDNLIDVDSSVESFKKFGDQ RYQIFTSWVSLQKDPSEINTQQIRNFMENIIQPPISDDKEKAEFLRSAKQSFAGIIIGNQ IRSDQKFMGVFDESLKERQEAEKNAEPAGGDWLDIFLSFVFNKKQSSDLKETLHQEPRPD FEQNLATTTTDIQGLPPEARDLLDERGNFSKFTLGDMEMLDVEGVADKNPNYKFNQLLIH NNALSSVLMGGHSNIEPEKVSLLYGDNGGPEARHDWNATVGYKNQQGSNVATLINAHLNN GSGLIIAGNENGIKNPSFYLYKEDQLTGLKQAMSQEEIQNKVDFMEFLAKNNAKLDNLSE KEKEKFQTEIGNFQKDRKAYLDALGNDHIAFVSKKDPKHLALVTEFGNGEVSYTLKDYGK KQDKALDGEVKTTLQGSLKYDGVMFVDYSNFKYTNASKSPDKGVGATNGVSHLEANFSKV AVFNLPNLNNLAITNHIRRDLEDKLLAKGLSPQEANKLIKDFLNSNKEMVGKVSNFNKAV AEAKNTGNYDEVKKAQKDLEKSIRKREHLEKEVVKKLESRNDNKNRMEAKAQANSQKDKI FALINKEASKEARAAAFDPNLKGIRSELSDKLENINKNLKDFGKSFDDFKNGKNNDFSKA EETLKALKDLVKDLGINPEWISKIENLNAALNDFKNGKNKDFSKVTQAKSDLENSIKDVI INQKITDKVDNLNQAVSETKLTGDFSKVEQALAELKNLSLDLGKNSDLQKSVKNGVNGTL VGNGLSKTEATTLTKNFSDIRKELNEKLFGNSNNNNNGLKNNTEPIYAQVNKKKTGQVAS PEESIYAQVAKKVSAKIDQLNEATSAINRKIDRINKIASAGKGVGGFSGAGRSASPEPIY ATIDFDEANQAGFPLRRSAAVNDLSKVGLSREQELTRRIGDLNQAVSEAKTGHFDNLEQK IDELKDSTKKNALKLFIESAKQVPTGLQAKLDNYAANSHTRINSNVRNGAINERATGMLT QKNPEWLKLVNNKIVAHNVGSAHLSEYDKIGFNQKNMKDYSDSFKFSTKLNNAVKDIKSN FVQFLTNTFSTGSYSLMKANVEHGVKNTTKSGFQKS NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atgactaacgaaaccattgatcaaacaacaacaccagatcaaacaccaaaccaaacggat tttgttccgcaacgatttatcaataatcttcaagtagcttttattaaagttgatagtgct gtcgcttcatttgatcctgatcaaaaaccaatcgttgataagaatgatagggataacagg caagcttttgagaaaatctcgcaactaagggaagaatacgccaataaagcgatcaaaaat cctgccaaaaagaatcagtatttttcagactttatcaataagagcaatgatttgatcaac aaagacaatctcattgatgtagattcttccgtagagagctttaagaaatttggggatcag cgttaccaaatttttacgagttgggtgtcccttcaaaaagatccgtctgaaatcaacacc caacaaatccgaaattttatggaaaatatcatacaaccccctatctctgatgataaagaa aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaatcaa atccgatcggatcaaaaattcatgggcgtgtttgatgaatctttgaaagaaaggcaagag gcagaaaaaaatgcagagcctgctggtggggattggcttgatatttttttatcatttgtg tttaacaaaaaacaatcttccgatctcaaagaaacgctccatcaagagccaaggcctgat tttgaacaaaatttagccactaccaccaccgacatacaaggcttaccgcctgaagctaga gatttgcttgatgaaaggggtaatttttctaaattcactcttggtgatatggaaatgttg gatgttgagggagtcgctgacaagaatcctaattacaagttcaatcaattattgatccac aataacgctctatcttctgtgctaatggggggtcatagtaacatagaacctgaaaaagtt tcattattgtatggggataatggtggccctgaagctaggcatgattggaacgctaccgtt ggttataaaaaccaacaaggcagtaatgtggccacactcattaatgcgcatcttaataac ggcagcgggttaatcatagcgggtaatgaaaatgggattaaaaaccctagcttctatctc tataaagaagaccaactcacaggcttgaaacaagcaatgagtcaagaagagatccaaaac aaagtggatttcatggaatttcttgcaaaaaacaacgctaaattagacaacttgagcgag aaagagaaagaaaaattccaaactgagattggaaatttccaaaaagaccgtaaggcttat ttggacgctctagggaatgatcacattgcttttgtttctaaaaaagacccaaaacattta gctttggttactgagtttggtaatggggaagtgagctataccctcaaagattatgggaaa aaacaagataaagctttagatggggaggtaaaaaccactcttcaaggtagcctaaaatat gatggcgtgatgtttgttgattattccaatttcaaatacaccaacgcctccaagagtcct gataagggcgtgggcgctacgaatggcgtttcccatttggaagcaaattttagcaaggtg gctgtttttaatttgcctaatttaaataatctcgctatcactaatcatataaggcgagat ttagaagataaattgttggctaaaggattgtccccacaagaagctaataagctcatcaaa gactttttgaacagcaacaaggaaatggttggaaaagtttcaaacttcaataaagctgta gctgaagccaaaaacacaggcaattatgacgaagtgaaaaaagctcagaaagatcttgaa aaatctataaggaaacgagagcatttagagaaagaagtagtgaaaaaattggagagcaga aacgacaacaaaaatagaatggaagcaaaagctcaagctaacagccaaaaagataagatt tttgcgttgatcaataaagaggctagtaaggaagcaagagcggccgctttcgatccgaat cttaaaggcatcaggagcgaattgtctgataaacttgaaaatatcaacaagaatttgaaa gactttggcaaatcttttgatgatttcaaaaatggcaaaaataatgatttcagcaaggca gaagaaacgctaaaagcccttaaagacttggtgaaagatttaggcatcaatccagaatgg atttcaaaaattgaaaaccttaatgcagctttgaatgatttcaaaaatggcaaaaataag gatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatgtgatc attaatcaaaagataacggataaagttgacaatctcaatcaggctgtatcagagactaaa ttaacaggcgatttcagtaaggtagagcaagccctagccgaactcaaaaacttgtcattg gatcttggaaaaaattctgatctacaaaaatccgttaaaaatggtgtaaatggaacccta gtcggtaatgggttgtctaaaacagaagccacaacgctcaccaaaaatttttcggacatc aggaaagaattgaacgagaaattatttggaaattccaataacaataataatggactcaaa aacaacacagagcctatttatgctcaagttaataaaaagaaaacaggacaagtagctagc cctgaagagtccatttacgctcaagttgccaaaaaggtgagtgcaaaaattgaccaactc aacgaagctacatcagcaataaatagaaaaattgaccggattaacaaaattgcatcagca ggtaaaggagtgggcggtttcagtggagcagggcgatcagctagccctgaacccatttac gctacaattgattttgatgaggcaaatcaagcaggcttccctttgagaagaagtgctgca gttaatgatctcagtaaagtagggctttcaagggaacaagaattgactcgtagaattggt gatctcaatcaggcagtgtcagaagctaaaacaggtcattttgacaacctagaacaaaag atagatgaactcaaagattctacaaaaaagaatgctttgaagctatttattgaaagcgcg aaacaagtgcctactggtttgcaggcgaaattggacaattacgctgctaacagccacaca cgcattaatagcaatgttcgaaatggagcaatcaatgaaagagcgaccggtatgctaacg caaaaaaaccctgagtggctcaagctcgtgaataataagatagttgcacataatgtggga agcgctcatttgtcagagtatgataaaattggattcaaccaaaagaatatgaaagattat tctgattcgttcaagttttccaccaagttgaacaatgctgtaaaagacattaagtctaac tttgtgcaatttttaaccaatacattttctacaggatcttacagcttgatgaaagcaaat gtggaacatggagtcaaaaacactacaaaaagtggtttccaaaaatcttaa

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