Helicobacter pylori SNT49: HPSNT_00040
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Entry
HPSNT_00040 CDS
T01916
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hen
Helicobacter pylori SNT49
Pathway
hen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPSNT_00040 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hen03019
]
HPSNT_00040 (groEL)
03110 Chaperones and folding catalysts [BR:
hen03110
]
HPSNT_00040 (groEL)
03029 Mitochondrial biogenesis [BR:
hen03029
]
HPSNT_00040 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hen04147
]
HPSNT_00040 (groEL)
Enzymes [BR:
hen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HPSNT_00040 (groEL)
Messenger RNA biogenesis [BR:
hen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HPSNT_00040 (groEL)
Chaperones and folding catalysts [BR:
hen03110
]
Heat shock proteins
HSP60 / Chaperonin
HPSNT_00040 (groEL)
Mitochondrial biogenesis [BR:
hen03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HPSNT_00040 (groEL)
Exosome [BR:
hen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPSNT_00040 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
HPSNT_00040 (groEL)
Exosomal proteins of breast cancer cells
HPSNT_00040 (groEL)
Exosomal proteins of colorectal cancer cells
HPSNT_00040 (groEL)
Exosomal proteins of bladder cancer cells
HPSNT_00040 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEN16203
UniProt:
G2MDI8
LinkDB
All DBs
Position
complement(7654..9294)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKSSKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVI
SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLHLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatcaaattttcagatagtgcaagaaaccttttatttgaaggcgtgaga
caactccatgacgctgtcaaagtaaccatggggccaagaggcaggaatgtgttgatccaa
aaaagctatggcgctccaagcatcactaaagatggcgtgagcgtggctaaagagattgaa
ttaagttgcccggtggccaacatgggcgctcaactcgttaaagaagtagcgagcaaaacc
gctgatgctgctggcgatggcacgaccacagcgaccgtgctggcttatagcatttttaaa
gaaggtttgaggaatatcacggctggggctaaccccattgaagtgaaacgaggcatggat
aaagccgctgaagcgattattaatgagcttaaaaaatccagcaaaaaagtaggcggtaaa
gaagaaatcacccaagtagcgaccatttctgcaaactccgatcacaatatcgggaaactc
atcgctgacgctatggaaaaagtgggcaaagacggcgtgatcaccgttgaagaagctaag
ggcattgaagacgaattggatgtcgtagagggcatgcaatttgatagaggctacctctcc
ccttactttgtaaccaacgctgagaaaatgaccgctcaattggataacgcttacatcctt
ttaacggataaaaaaatctctagcatgaaagacattctcccgctattggaaaaaaccatg
aaagagggcaaaccgcttttaatcatcgctgaagacattgaaggcgaagctttaacgact
ctagtggtgaataaattaagaggcgtgttgaatatcgcagcggttaaagctccaggcttt
ggggacagaagaaaagaaatgctcaaagacatcgctattttaaccggcggtcaagtcatt
agcgaagaattgggcttgactttagaaaacgctgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggccatagccatgat
gtcaaagacagagtcgcgcaaatcaaaacccaaatcgcgagcacgacaagcgattacgac
aaagaaaaattgcaagaaagattggctaaactctctggcggtgtggctgtgattaaagtg
ggtgctgcgagtgaagtggaaatgaaagagaaaaaagatcgggttgatgatgcgttgagc
gcgactaaagcggccgttgaagaaggcattgttattggcggcggtgcggccctcattcgt
gcggctcaaaaagtgcatttgcatttacacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattagctcaaatcgctatcaatgccggttatgatggcggc
gtggtcgtgaatgaagtggaaaaacacgaagggcattttggttttaacgctagcaacggc
aagtatgtggatatgtttaaagaaggcattattgaccccttaaaagtagaaaggatcgct
ctacaaaatgcggtttcggtttcaagcctgcttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcaaccccagcaatgcctgatatgggtggcatgggcggtatgggt
ggcatgggcggcatgatgtaa
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