Helicobacter pylori SNT49: HPSNT_01250
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Entry
HPSNT_01250 CDS
T01916
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hen
Helicobacter pylori SNT49
Brite
KEGG Orthology (KO) [BR:
hen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hen03016
]
HPSNT_01250
03036 Chromosome and associated proteins [BR:
hen03036
]
HPSNT_01250
Transfer RNA biogenesis [BR:
hen03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPSNT_01250
Prokaryotic type
HPSNT_01250
Chromosome and associated proteins [BR:
hen03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HPSNT_01250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
AlaDh_PNT_C
Pyr_redox
HI0933_like
FAD_binding_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AEN16423
UniProt:
G2MD66
LinkDB
All DBs
Position
complement(248369..250234)
Genome browser
AA seq
621 aa
AA seq
DB search
MVKESDILVIGGGHAGIEAGLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKE
VDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQ
EMTESLIIENNEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNS
LALNLRELGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSCF
ITYTNLITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIN
KSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKIK
GLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGTN
EPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELEEDKQAIQENLKRLKEC
VLTPSKEVLKRLNELDENPINDKVDGIGLLARDSFNIEKMRSFFSFLAPLNDRVLEQIKI
ECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI
SGITPANLDVLHLYIHLRKNS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagaaagtgatattttagtgattggtggggggcatgcaggcattgaagcgggc
ttgattgcagccaaaatgggggctagagtgcatttaatcaccatgctcatagacacgatc
ggtttagcgagctgtaacccggccattgggggcttgggtaaagggcatttgacgaaagaa
gtggatgttttagggggggctatgggaattattacggataatagcggtttgcaatatcgt
gtgttaaacgcttctaaagggccggcagtcagggggactagagcgcaaattgatatggat
acttaccgcatttttgcgagaaatcttgttttaaacacccccaatttgagcgtctctcaa
gaaatgaccgaaagtttaatcattgaaaataatgaggtggtgggcgtaaccacgaacatt
aacaacacttataaagctaaaaaagtgatcatcaccacaggcacttttttaaaaggggtg
gtgcatattggcgagcaccaaaaccaaaacgggcgctttggggaaaacgcttctaattct
ttagccttgaatttaagggagcttggctttaaggtggatcgcttaaaaaccggcacttgc
ccaagagtggcgggcaatagcattgattttgaaggcttagaagagcattttggggacaca
aaccctccctattttagctataaaaccaaagattttaaccccacccaactctcttgtttt
atcacttacactaaccttattacccaccaaatcatcagggataatttccaccgagccccc
ctatttagcggtcaaattgaaggcataggcccaaggtattgccctagcattgaagataaa
atcaaccgcttcagcgaaaaagaacgccaccagctgtttttagagcctcaaaccattaac
aaaagcgaatattatatcaacggcttaagcacctctttgcccctagacgtgcaagaaaag
gttatccattctatcaaaggcttagaaaacgccctcatcacgcgctatggctatgcgata
gagtatgattttatccagcctacagaattgacccacactttagaaaccaaaaaaatcaaa
gggctttatttagccgggcaaatcaatgggactaccggctatgaagaagcggcggctcaa
gggcttatggccgggattaatgcggtattagccctaaagaatcaagccccctttatttta
aaacgcaatgaagcttatatcggtgttttgattgatgatttggtcactaaaggcacgaat
gagccttacagaatgtttaccagccgggccgaataccgcttgcttttaagagaagacaac
acgctttttaggttgggcgaacatgcctatcgtttagggcttatggaacaggatttctat
aaggaattagaagaagacaaacaagcaatacaagaaaacttgaaacgccttaaagaatgc
gtccttacccctagtaaagaagtgttaaaacgcctaaacgaattagatgaaaaccctatc
aatgacaaggttgatggcattggccttttagcgcgcgatagttttaatatagaaaaaatg
cgctcctttttcagctttttagcccccttgaacgatcgggttttagagcagattaaaatt
gaatgcaaatataatatttatattgaaaagcaacacgaaaatatcgctaaaatggatagc
atgctcaaagtttctatccctaaagattttgtgtttaaaggcattccaggccttagctta
gaagcggtagaaaagttagaaaaattccgccccaaaagcctttttgaagcctcagaaatc
agcgggatcactccagcgaatttagatgttttgcatttatacatccatttgcggaaaaac
tcttaa
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