Helicobacter pylori SNT49: HPSNT_01430
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Entry
HPSNT_01430 CDS
T01916
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hen
Helicobacter pylori SNT49
Pathway
hen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPSNT_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hen03019
]
HPSNT_01430
03009 Ribosome biogenesis [BR:
hen03009
]
HPSNT_01430
Enzymes [BR:
hen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPSNT_01430
Messenger RNA biogenesis [BR:
hen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPSNT_01430
Ribosome biogenesis [BR:
hen03009
]
Prokaryotic type
rRNA helicases
HPSNT_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
UvrD-helicase
AAA_30
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AEN16457
UniProt:
G2MDA0
LinkDB
All DBs
Position
283650..285128
Genome browser
AA seq
492 aa
AA seq
DB search
MEFNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRTSI
IAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHGTKVSEAIISLYEQLTEIFEPS
QLVLKLLSLQFETTKIGLNQQEIDAIQNPKEKTPKPSNKKTHPHEPARSFKKGQHKDRHS
KTNHHSKKPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaatcaaccaccactccctacagaaattgatgatgacgcttatcataagcct
agttttaatgatttgggcttgaaagaatcggttttaaaatccgtttatgaagccggtttc
acttccccaagccccattcaagaaaaggccattccggctgttttgcaaggcagagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccaccagagaattagcc
atgcaaattagcgatgagattttcaaattgggcaaacacaccaggactaagaccgtgtgc
gtgtatggaggccagagcgttaaaaaacaatgcgaattcattaagaaaaacccccaagtg
atgatcgctacaccaggaagactgctcgatcacttaaagaacgaacgcatccataaattc
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactacctccctagcgaagcgcagattttgcttttttcagcc
acgatgccagagccgattaaaagactagcggataagattttagaaaaccctattaaaatc
catatcgctccttctaatatcactaacaccgacatcacccaacgcttttatgtgatcaat
gagcatgagagggctgaagctatcatgcgccttttagacacccaagcgcccaaaaagagc
attgttttcacgcgcaccaaaaaagaagccgatgaattgcaccaattccttgcttctaaa
aattacaaaagcaccgctttgcatggggatatggatcaaagggatcggcgcacttctatc
atagcgtttaaaaaaaatgacgctgatgtgttagtggctaccgatgtggcgagccgtggg
ttagacattagcggtgtaagccatgtgtttaattaccacttgcccctaaataccgagagc
tatatccatcgcatcgggagaaccgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccccttagaatacaaagagcttttacgcatgcaaaaagaaatcgattcagagatt
gaactttttgaaatccccaccattaacgaaaatcagatcatcaaaaccttacatggcact
aaagtgtctgaagcaatcatcagcctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccactaaaattggcttaaaccag
caagaaattgatgcgattcaaaaccctaaagaaaaaacgccaaaaccctctaacaaaaaa
acgcacccgcatgagccagcgcgttctttcaaaaagggtcagcataaagacagacactct
aaaacaaaccaccattctaaaaaacccaaacgccgttaa
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