Helicobacter pylori SNT49: HPSNT_02235
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Entry
HPSNT_02235 CDS
T01916
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
hen
Helicobacter pylori SNT49
Pathway
hen02020
Two-component system
hen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPSNT_02235 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPSNT_02235 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hen03021
]
HPSNT_02235 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hen02035
]
HPSNT_02235 (fliA)
Transcription machinery [BR:
hen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPSNT_02235 (fliA)
Bacterial motility proteins [BR:
hen02035
]
Flagellar system
Flagellar assembly proteins
Stator
HPSNT_02235 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Microp_apicomplexa_17
MarR
MarR_2
DUF4202
TetR_C_44
KORA
HTH_34
HTH_10
DUF7440
Motif
Other DBs
NCBI-ProteinID:
AEN16616
UniProt:
G2MBQ1
LinkDB
All DBs
Position
449898..450674
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AA seq
258 aa
AA seq
DB search
MILMMENRMPKEIQKTETSEINEKNIEKVLNAYDKQQHHHQDDLAIQYLPAVRAMAFRLK
ERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRS
NRKLIKSIDIEITKHLNEHGKEPSDAYLAQTLGENIEKIKEAKTASDIYALVPIDEQFNA
IEQDEITKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQ
IIKEVIKKVRKSLGVDHG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactgaaactagcgaa
ataaacgaaaaaaatatagaaaaggttttgaacgcctatgataagcaacaacaccaccat
caagacgatctcgctatccagtatctaccggccgtgcgtgctatggcgtttcgtttaaaa
gagcgcttgcccagctctattgattttaacgatctggtttctattggcactgaagaattg
attaaattagccaggcgttatgagagcgcgttaaacgattctttttgggggtatgctaaa
actcgtgtcaatggagcgatgttagattatttgcgctctttagatgtaatttctcgctcc
aacagaaagctgattaaaagcattgatattgaaatcaccaaacaccttaatgagcatggg
aaagagcctagcgatgcgtatttagcgcaaactttaggcgaaaatattgaaaaaattaaa
gaagccaaaacggcttcagatatttatgcgttagtgcccatagatgaacaattcaatgcg
attgagcaagatgaaatcactaaaaaaattgaagcagaagagttgttagagcatgtccaa
aaagcgctgaatcaaatgagcgaaagagagcaaatccttatccagctttattactttgaa
gagttgaatttgagcgagattaaagagattttaggcatcactgaatcgcgcatttctcaa
atcattaaagaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga
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