Helicobacter pylori SNT49: HPSNT_04805
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Entry
HPSNT_04805 CDS
T01916
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hen
Helicobacter pylori SNT49
Brite
KEGG Orthology (KO) [BR:
hen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hen03016
]
HPSNT_04805 (truD)
Enzymes [BR:
hen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPSNT_04805 (truD)
Transfer RNA biogenesis [BR:
hen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPSNT_04805 (truD)
Prokaryotic type
HPSNT_04805 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
AEN17105
UniProt:
G2MF68
LinkDB
All DBs
Position
981350..982495
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AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHASIDFHFNSSTRDFCVHEVPLYEWSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYAPLLEKSTSNFQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTKQVLEQIAQFGMPNYFGSQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSLKENLEFFKQKNLN
INSNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKEGERFLKKEAVPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLSSHAKTLGSRRFFWVFVENVTSQYIKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccttattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcactagggatttttgcgtgcatgaagtgcctttgtatgaatggagtaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaaaaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcactgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaagcacgagcaactttcaagaaagaaaccttaaaatcctgtctttgaattaccat
cataataaaatcaaattagggcatttaaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaaaacaaagcaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggatcgcaacgcttcgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccatcaaaaattaaacgcttttttaatt
tcaagctatcagagttatttgtttaacgcgcttttaagtaaacgattagaaatcagtaaa
atcattagtgcttttagcctaaaagaaaatttggaattttttaaacaaaaaaatttaaat
atcaattcaaacaccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gagggcgaaaggtttttgaaaaaagaagctgtgcctacggggttattagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataatctttta
agtagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgtagaaaatgta
acttctcaatatataaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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