Helicobacter pylori SNT49: HPSNT_05420
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Entry
HPSNT_05420 CDS
T01916
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hen
Helicobacter pylori SNT49
Brite
KEGG Orthology (KO) [BR:
hen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hen03016
]
HPSNT_05420 (truA)
Enzymes [BR:
hen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPSNT_05420 (truA)
Transfer RNA biogenesis [BR:
hen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPSNT_05420 (truA)
Prokaryotic type
HPSNT_05420 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEN17219
UniProt:
G2MCB2
LinkDB
All DBs
Position
1111769..1112497
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AA seq
242 aa
AA seq
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MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNTLGIKSVVVAAGRTDKGVHANNQV
LSFHAPKHWNAAKLFYCLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDLLNTALKQFTGKHDFSLFKKEGGATTNPNRIIFNAFAYTAFIMGHEC
VVFKIIGDAFLRSSVRLIIQTCVQYSLEKITLAEIEMQIHNLKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcccaacaaactcggcgttcaagataagatagagagcgctttaaatacgctagggatt
aaaagcgttgtggttgcggccgggcgcacggataaaggcgtgcatgcgaataaccaggtt
ttgtcttttcacgctccaaaacactggaatgccgctaaattattttattgtctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactagatttattaaataccgctttaaag
caattcacaggcaagcatgatttttctttgtttaaaaaagaaggcggggctacaaccaat
cctaatcgcatcatttttaacgcttttgcttatacagcctttatcatggggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttacgctccagcgtgcgtttgatcattcaa
acatgcgttcaatattccttagaaaaaatcacgctcgctgaaattgaaatgcaaatccac
aacctcaaagccactataagaacacccataatggctaatggcttgtatttgcacagggtg
tattattga
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