Helicobacter pylori 26695: C694_00430
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Entry
C694_00430 CDS
T02282
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
heo
Helicobacter pylori 26695
Pathway
heo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
heo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C694_00430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
heo03021
]
C694_00430
Transcription machinery [BR:
heo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C694_00430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
MCR_beta_N
WYL_3
DUF1687
Sigma70_r4_2
ThrE
Motif
Other DBs
NCBI-ProteinID:
AFV41307
LinkDB
All DBs
Position
complement(92952..94967)
Genome browser
AA seq
671 aa
AA seq
DB search
MKKKANEEKAQKRAKTEAKAEATQENKTKENNKAKESKIKESKIKEAKAKEPIPVKKLSF
NEALEELFANSLSDCVSYESIIQISAKVPTLAQIKKIKELCQKYQKKLVSSSEYAKKLNA
IDKIKKTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIE
LSKQIRLGEDIILDAICSVPYLIDFIYAYKDALINRERRVKELFRSFDDDDENSVSDSKK
DEDNEEDEENEERKKVVSEKDKKRVEKVQESFKALDKAKKEWLKALEAPIDEREDELVRS
LTLAYKRQTLKDRLYDLEPTSKLINELVKTMETTLKSGDGFEKELKRLEYKLPLFNDTLI
ANHKKILANITNMTKEDIIAQVPEATMVSVYMDLKKLFLTKEASEEGFDLAPNKLKEILE
QIKRGKLISDRAKNKMAKSNLRLVVSIAKRFTSRGLPFLDLIQEGNIGLMKAVDKFEHEK
GFKFSTYATWWIKQAISRAIADQARTIRIPIHMIDTINRINKVMRKHIQENGKEPDLEVV
AEEVGLSLDKVKNVIKVTKEPISLETPVGNDDDGKFGDFVEDKNIVSSIDHIMREDLKAQ
IESVLDQLNEREKAVIRMRFGLLDDESDRTLEEIGKELNVTRERVRQIESSAIKKLRSPQ
YGRILRNYLRI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaagctaacgaagaaaaagcccaaaaaagagctaaaacagaagccaaagca
gaagccacacaagaaaataaaactaaagaaaacaataaagccaaagaaagcaaaattaaa
gaaagcaaaatcaaagaagctaaagcgaaagaacctattcctgttaaaaagcttagtttt
aatgaagcgttagaagaattgttcgctaattccttaagcgattgcgtttcttatgagtcc
atcattcaaatcagcgcgaaagtccccactctagcccaaatcaaaaaaatcaaagaattg
tgccaaaaataccaaaagaaattagtcagctcttcagaatacgctaaaaaactcaatgcg
attgacaagattaaaaaaaccgaagaaaagcaaaaagttttagatgaagaattagaagat
ggctatgactttttgaaagaaaaggattttttagagtggagcagaagcgatagcccagtg
cgcatgtatttgcgcgaaatgggggatataaaacttttaagcaaagatgaagagattgaa
ttgagcaagcaaatccgcttgggtgaagacattattttagacgcgatctgctcggtgccg
tatttgattgattttatctatgcgtataaagacgctttaatcaatcgtgaaagaagggtt
aaagagcttttcaggagctttgatgatgacgatgaaaatagcgtgagcgattctaaaaaa
gatgaagacaacgaagaagatgaagaaaacgaagaaaggaaaaaagtcgtttctgaaaaa
gacaagaagcgtgtagaaaaggttcaagaaagctttaaagccctagacaaggctaaaaaa
gaatggcttaaagcccttgaagcccccatagatgaaagagaagacgaattggtgcgttca
ttgaccctagcttacaaacgccaaacactcaaagacagactctatgatttagaacctacc
agcaaactgattaatgaattagtcaaaacgatggaaaccactttaaaaagcggcgatggg
tttgaaaaagagttgaaacgcttggaatacaaactgcccttattcaatgacactctcatc
gcaaaccataaaaaaatccttgccaatatcactaacatgactaaagaagatattatcgct
caagtgccagaagcgactatggtgagcgtgtatatggatcttaaaaagctttttttgact
aaagaagcgagcgaagaaggctttgatctagcccccaacaagctaaaagaaattttagag
caaatcaaaagagggaagttgatttccgatcgcgctaaaaacaaaatggctaaatccaat
ttaaggttggtggtgagcatcgctaaacgattcacgagcagaggcttaccattcttggat
ttgattcaagagggcaatattggcttgatgaaagcggtggataagtttgagcatgaaaag
ggcttcaagttttctacctatgcgacctggtggatcaaacaagctatcagcagagccata
gccgatcaggcccgcactatccgcatccccattcacatgattgatacgattaatcgcatc
aataaagtcatgcgcaaacacattcaagaaaacggcaaagagcctgatttagaagtggtg
gctgaagaagtggggctttcgttagataaagtgaagaatgtgattaaggtgactaaagag
cctatcagtttggaaaccccagtcggcaatgatgatgatggcaagtttggggatttcgtg
gaagataagaatatcgtcagctccattgatcacatcatgcgagaagatttgaaagcacaa
attgaaagcgttttggatcagttgaatgagcgagaaaaagcggtgatccgcatgcgtttt
gggcttttagacgatgaaagcgatcgaactttagaagaaattggcaaggaattgaatgtt
actagagaaagggtgcgccagattgaaagctctgcgattaaaaaattgagaagcccgcag
tacgggcgcattttaagaaactatttgcgcatttga
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