Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
heo Helicobacter pylori 26695
|
Brite |
KEGG Orthology (KO) [BR:heo00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:heo03032]
C694_02575 (gyrB)
03400 DNA repair and recombination proteins [BR:heo03400]
C694_02575 (gyrB)
Enzymes [BR:heo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C694_02575 (gyrB)
DNA replication proteins [BR:heo03032]
Prokaryotic type
DNA Topoisomerases
C694_02575 (gyrB)
DNA repair and recombination proteins [BR:heo03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C694_02575 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
527696..530017
|
AA seq |
773 aa
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPTSELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYEDGLKQFVKDSAKKELLTPIIS
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIGNN
IKTKESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSLDMKVLEKSILEKLEGLNYQILRSFATEESLHLHTQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAVFSLCMGDEVEPRRAFIQAHAKDVKQLDV |
NT seq |
2322 nt +upstreamnt +downstreamnt
atgcaaaattaccagagccatagtattaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggtgataccaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgcgatacgattaatatcact
ttgaccgatgagggttcatgcatcgtagaagataacgggcgaggcattcctgtagatatt
caccccacggaaaaaatccccgcttgcaccgtggttttaacgattttgcatgcggggggc
aagtttgataacgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttgagcaaacgcttgattatgaccattaaaaaagagggtcaaatttatcgc
caagagtttgaaaagggtattcctactagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttacaaaaacgctttaaagaaatggcgtatcttaacgatggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagagacttatttctatgaagac
ggcttgaaacaattcgttaaagacagcgctaaaaaagaattgctcacccccattatttcg
tttaaaagcatggatgaagaaacgcgcacttctatagaagtcgctctagcgtatgctgat
gattataatgaaaacactttaagctttgtgaataacattaaaacttctgaaggtggcacg
catgaggcgggctttaaaatgggcttgtctaaagcaattttgcaatatattggcaataat
attaaaaccaaagagtcacgccccatctctgaagatattaaagaggggttgatcgctgtt
gtgagcttgaaaatgagcgagcctttgtttgaagggcagactaaatccaaactcggcagt
tcgtatgcgcgcgcgttggtttcaaaattagtctatgataaaatccatcaatttttagaa
gaaaaccctaacgaagccaaaatcattgccaataaagccctactagctgcaaaagccaga
gaagccagtaagaaagccagagagcttacaaggaaaaaagataatttgagtgtcggcact
ttgcctggaaaattagccgattgccagagtaaagaccccttagagagtgaaatcttttta
gtggagggcgatagtgcgggcgggagcgctaaacaagggcgcgatagggttttccaagcg
atcttgcccctaaaaggtaagattttaaatgtggaaaaaagccatttatcaaaaatccta
aaatcagaagaaattaaaaacatgatcacggcttttgggtgcggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttgcgcccgctgattgaa
caagggcatgtttatatcgctcaagcccctctttacaaatacaagaagggcaagacagaa
atttatcttaaagacagcgtcgctttggatcattttttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaacttgttaaaagtggcacgccat
taccgctatgcgcttttggaattagaaaaacgctacaatttgctagaaattttacgcttt
ctcattgaaactaaggacgccttaagccttgatatgaaagttttagaaaaaagcatttta
gaaaaattagagggcttgaattatcagatcttacgctcttttgccactgaagaaagctta
catttgcacacgcaaacccctaaaggcttggtggaatttaacctagatgacaatctcttt
aaagaagtgttgtttgaagaagcgaattacacttaccaaaagcttatggagtataattta
gacttcttagaaaataaggatattttggcgtttttagaagaagtggaaaatcacgctaaa
aagggagcgaatatccagcgctataaggggctaggcgagatgaaccctaatgatttgtgg
gaaacgaccatgcataaagaaaaccgcagcttgatcaaactcaaaattgaagatttagaa
aaaaccgatgcagtcttttcgctttgcatgggcgatgaagtagagcctagaagagccttt
atccaagcgcatgctaaagatgtgaaacaactagatgtgtaa |