Helicobacter pylori Puno120: HPPN120_01260
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Entry
HPPN120_01260 CDS
T01919
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hep
Helicobacter pylori Puno120
Pathway
hep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPPN120_01260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hep03019
]
HPPN120_01260
03009 Ribosome biogenesis [BR:
hep03009
]
HPPN120_01260
Enzymes [BR:
hep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPPN120_01260
Messenger RNA biogenesis [BR:
hep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPPN120_01260
Ribosome biogenesis [BR:
hep03009
]
Prokaryotic type
rRNA helicases
HPPN120_01260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
P-loop_SecA
AAA_30
AAA_22
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEN14894
LinkDB
All DBs
Position
247838..249316
Genome browser
AA seq
492 aa
AA seq
DB search
MEFNQPQLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRTSI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKTPNKKTHQHEQARSFKKGQHKDRHP
KTNHHSKKPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaatcaaccacaactccctacagaaattgatgatgacgcttaccataagccg
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagccggtttc
acctccccaagccccattcaagaaaaggccattccggctgttttgcaaggccgagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccactagagaattagcc
atgcaaattagcgatgagatttttaaattgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggccagagcgttaaaaagcaatgcgaatttattaagaaaaacccccaagtg
atgatcgctacaccaggaaggttgctagatcatttaaaaaacgaacgcatccataaattt
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactacctccctagcgaggcgcagatcttgcttttttcagcc
acgatgccagagccgattaaaagactggcggataagattttagaaaaccctattaaaatc
catatcgccccttctaatatcactaacactgacatcacccaacgcttttatgtgatcaat
gagcatgagagggctgaagcaatcatgcgccttttagacacccaagcgcccaaaaaaagc
attgttttcacgcgcaccaaaaaagaagccgatgaattgcaccaattccttgcttctaaa
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcggcgcacttctatc
atggcgtttaaaaaaaatgacgctgatgtgttggtggctacagatgtggcgagccgtggg
ttggatattagcggtgtaagccatgtgttcaattaccacttgcccctaaatacagagagc
tatatccatcgcatcgggagaaccgggcgcgcgggcaaaaaaggcatggcgatcacttta
gtaaccccattagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgaaatccccaccattaacgaaaatcagatcatcaaaaccttgcatgacgct
aaagtgtctgaagggatcatcagtctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaagcttttgagtttgcagtttgaaaccagcaaaattggcttaaaccag
caagaaattgatgcgattcaaaaccctaaagaaaaaacgccaaaaacccctaacaaaaaa
acgcaccagcatgagcaagcgcgttctttcaaaaagggtcagcacaaagacagacaccct
aaaacaaaccaccattctaaaaaacccaaacgccgttaa
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