Helicobacter pylori Puno120: HPPN120_03525
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Entry
HPPN120_03525 CDS
T01919
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hep
Helicobacter pylori Puno120
Pathway
hep02020
Two-component system
hep02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPPN120_03525
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPPN120_03525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hep03021
]
HPPN120_03525
Transcription machinery [BR:
hep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPPN120_03525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AEN15324
LinkDB
All DBs
Position
complement(717335..718579)
Genome browser
AA seq
414 aa
AA seq
DB search
MAVLRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIENKRIKNFSDRF
SAKNSSDHLENFAIASKSLFETLEAQIIPPLFPTETSQKIAMDIINGLDSEGYFEENIEE
RARILGVESEVYEKVRQRFSCLNPAGIGAKDVKESFLFQLEGRELDNNELYEEARKIILN
LEKHHEFSKDFYYEKALKILKSFKNPPAIEFLEKEIEVIPELFILEVDGEIIVRLNDESY
PTISLEENRFKDSAYLKEKLKEAKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKELRPL
KLLDLANEFNHSVSTISRAISNKYLACQRGVFPIKHFFSTALDNSETSNAVIKDYLLELI
KNEDKKEPLSDAKILELIEEKFHLKMVRRTITKYRQLLNIASSSERKKLYLMRA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcggttttacgtgcaaaccttagccctaaaaacaaattaaacgctaccttaaaaggg
tggctccccattttacaaagcgagcttgaagatttagaagaagtgttaaaacaaaacgcc
ctagataaccccttaatcaaaattgaaaacaaacgcatcaaaaattttagcgatcgtttt
agcgctaaaaatagcagcgatcatttagaaaatttcgcaatcgcttctaaaagccttttt
gaaaccttagaagctcaaatcattccccctctctttcccactgaaacctctcaaaaaatc
gctatggatattatcaacgggctggatagtgaagggtattttgaagaaaacattgaagaa
agggctagaattttaggggtagagagcgaagtttatgaaaaagtgcgccagcgttttagt
tgccttaatcccgctggcattggtgctaaagatgtgaaagagagctttttattccagtta
gagggtagggaattagacaataatgagctttatgaagaagcgcgaaaaatcattttaaat
ttagaaaaacaccacgaattttctaaagatttctattatgaaaaggctttaaagatttta
aaatcctttaaaaaccccccggctattgagtttttagaaaaagaaatagaagtcattccg
gagctttttattctagaagtggatggtgaaatcatcgtgcgtttgaacgatgagagctac
ccgacgatcagtttagaagaaaatcgctttaaagatagcgcttatttaaaagaaaaatta
aaagaggctaaggatttgattgatgcgttgaatttgagaaaagccacgatttataaaatc
ggtctcatgcttttagagtatcaatacgatttttttaagggtaaggaattgcgcccttta
aaattattggatttagccaatgagtttaaccactctgtaagcacgatttcaagggccatt
tctaataaatatttggcatgtcaaaggggggttttccctattaagcatttctttagcacc
gccttagacaatagcgaaacttcaaacgctgtgatcaaagactaccttttagaattgatc
aaaaatgaagacaaaaaagagcctttgagcgacgctaagattttagaactcattgaagaa
aaattccatttgaaaatggtaagaagaacgatcaccaaataccgccaactgctcaacatc
gcttcttcaagcgaaaggaaaaagctctatttgatgcgtgcttga
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