Helicobacter pylori Puno120: HPPN120_04490
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Entry
HPPN120_04490 CDS
T01919
Name
(GenBank) rep helicase, single-stranded DNA-dependent ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hep
Helicobacter pylori Puno120
Pathway
hep03420
Nucleotide excision repair
hep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPPN120_04490
03430 Mismatch repair
HPPN120_04490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hep03400
]
HPPN120_04490
Enzymes [BR:
hep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPPN120_04490
DNA repair and recombination proteins [BR:
hep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPPN120_04490
MMR (mismatch excision repair)
Other MMR factors
HPPN120_04490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
Viral_helicase1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEN15513
LinkDB
All DBs
Position
905206..907236
Genome browser
AA seq
676 aa
AA seq
DB search
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
ALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSHKNPEHTPYAAFYENILDEFENTK
KKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEV
VKSGHFNKPALLNYNDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSYISDIGSNTAKDIHEALMLLG
NGDLKLALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPK
ISLNGAKMLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFK
KLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaactttgcaattaaaccccgagcaactaaaagcggccaaggctttgaaaggg
tataatttagtgattgcaagcgccggcacaggaaagacttctacgattgtggggcgtatt
ttatacctgcttgataacggcatcaaacctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgattgctagggtggctaaatattccaagttaagctccaaaatt
gaagcgggcactttccatgcggtggcgtatcgctatttgaaagagcattaccccaattta
agcctaaaacaacctaaagaattgaaaaaacttttagaaagcattgtggataccaaaaac
gcgctaacagatgacgataaaaagccctacacttcgcaacacctctacgccctctattct
ctttataccaacgctctaaaacaagaagattttagcgcatggctttctcataaaaaccct
gaacacacgccatatgccgccttttatgaaaacattttagacgaatttgaaaacactaaa
aagaagcataattatattgactataacgacttactgctgttgtttaaacaagcgatgcta
gaaagacctagcccttataaagaagtgctttgcgatgagtttcaagacactaacccctta
caagaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgcttttaatggggcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccaagttttcacgctcaccaaaaactaccgctcttctaaagagatttta
gatctcgctaatcaagtgatacaacacaacgagcgcatttaccctaaaaatttagaagtg
gtgaaatcaggacatttcaataagcctgcgcttttaaattacaacgacaatatcgcgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaagaattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagctgctttaagatcccacaatgtgcca
agcaaaagaaaagggagcgcaagcttctttgaatccaaagaagtggcgttagcgttagac
atttgcgcgctcatctttaaccctaaagacattatggcagcaatccatgttttaagctat
atcagcgatattggctctaacaccgctaaagacattcatgaggccttaatgcttttaggc
aatggcgatctcaaactagccctaacccaccctaataaagaagccaaaatttacaccaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgctttagaaaacagctca
aggtttaatagcgtgatagataaagcgttccattcgcacccggtgttgatgcaccctaaa
atctcactcaatggggctaaaatgcttagcgattttttcattctttataccaaagcccct
acccattcccctagcgctttaatcaaacacattttagaaagcgcgttttttcaaaccttt
aaaacacgccttttaaaagagcgatccaaaaataaggacggctcttataatgagtttaaa
aaactccaggcgcaaaaacgcttcaatgaaaaaatggacttgctgagttctttggcgaaa
aattaccaaaatttagggcgttttttaaacggcactttaataggatctagtgaagccacg
caaggcgagggcgtgaatttattgagcgtgcatgcttctaaaggcttggaatttaaagat
gtttatattatagatttaatggagggccgtttccctaaccacaagctcatgaataccggt
ggaggcattgaagaagagcggcggcttttttatgtcgctatcacaagggctaaggaaaat
ttatggctttcttatgcaaaaaacgaattgagagaaaacgccaaacctaaagagcataag
ccctcggtgtttttgtatgaagcggggcttttgaaacccgatttaaaataa
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