Helicobacter pylori Puno120: HPPN120_04560
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Entry
HPPN120_04560 CDS
T01919
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hep
Helicobacter pylori Puno120
Brite
KEGG Orthology (KO) [BR:
hep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hep03016
]
HPPN120_04560 (truD)
Enzymes [BR:
hep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPPN120_04560 (truD)
Transfer RNA biogenesis [BR:
hep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPPN120_04560 (truD)
Prokaryotic type
HPPN120_04560 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
AEN15527
LinkDB
All DBs
Position
931219..932364
Genome browser
AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHANIDFYFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLNTLEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGAQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSVKENLEFFKQKNLN
INPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQNNLLSSHAKTLGSRRFFWVFVENVTSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgaatattgatttttat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaattcagcaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaaacactttagaaatgctt
caaattttttctcaaattttaggggtaagaatcgctgaattgggttatgcaggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaagaaaccttaaaatcctgtctttgaattaccac
cataataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaagactgaacaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggagcgcaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagtgtcaaagaaaatttagaattttttaaacaaaaaaatttaaat
atcaatccaaacactctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagctgcgcctaccgggttactagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagaataacctttta
agtagccatgctaaaacgctaggatctaggcggtttttttgggtgtttgtagaaaatgta
acttctcaatatgtgaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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integrated database retrieval system
