KEGG   Helicobacter pylori Puno120: HPPN120_05605
Entry
HPPN120_05605     CDS       T01919                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hep  Helicobacter pylori Puno120
Pathway
hep02024  Quorum sensing
hep03060  Protein export
hep03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPPN120_05605
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPPN120_05605
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPPN120_05605
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hep02044]
    HPPN120_05605
Enzymes [BR:hep01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPPN120_05605
Secretion system [BR:hep02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPPN120_05605
  Eukaryotic Sec-SRP protein
   HPPN120_05605
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 AAA_22 Zeta_toxin AAA_30 AAA_24 nSTAND3 AAA_17 SLFN-g3_helicase cobW NPHP3_N AAA_19 6PF2K APS_kinase ArsA_ATPase AAA_16 AAA_14 Fer4_NifH T2SSE AAA AAA_11 AAA_33 ABC_tran NTPase_1 Thymidylate_kin ParA KTI12 NACHT ResIII AAA_5 TsaE AAA_18 PhageMin_Tail ParBc YqeC ATP_bind_1
Other DBs
NCBI-ProteinID: AEN15713
LinkDB
Position
complement(1142038..1143384)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEILNPHEVLYVADALSGQDGVKSASAFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMANALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcactaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagatcgggcgttagatgaattgaaaaaaacgctcttaaaaaatgat
gtgcatcataaagtggctagggaattgctcaaaaaagtggaaagtcaaaccaaacttaat
ggcattggtaagcagcaatttttagacgctttagaaaagagcttgttagaaattttaagc
gctaaagggagcagtggttttactttcgctcaaacgccccccaccgtggttttaatggca
ggtttgcaagggagcggtaagacgaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcctagcggcagtggagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagttttttatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttgctc
gtggatagcgcggggcgtttagccattgataaagagcttatgcaagaattaaaagaagtt
aaagagatcttaaacccccatgaggtgctgtatgttgcagacgccttgagcgggcaagat
ggggtcaaaagcgcgagcgcatttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgatagcgattctaaagggggtatcgccttaggtatcacttaccaattaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatttagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgcc
agcgttttaaaccctaatgaagccaaagatttaagcaaaaaactcaaaaaagggcaattc
actttcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaaacgcgctaaaagacacggattta
gaaagctctttagaagtgaaaaaaatcaaggctatggtcaattccatgaccaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggt
ttagaagtgtctgaaatcaatcgcatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaacgaataaaaagggcattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacgccccctaaaatgcgctga

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