Helicobacter pylori F32: HPF32_0193
Help
Entry
HPF32_0193 CDS
T01911
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
heq
Helicobacter pylori F32
Pathway
heq00260
Glycine, serine and threonine metabolism
heq00460
Cyanoamino acid metabolism
heq00630
Glyoxylate and dicarboxylate metabolism
heq00670
One carbon pool by folate
heq00680
Methane metabolism
heq01100
Metabolic pathways
heq01110
Biosynthesis of secondary metabolites
heq01120
Microbial metabolism in diverse environments
heq01200
Carbon metabolism
heq01230
Biosynthesis of amino acids
heq01240
Biosynthesis of cofactors
heq04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPF32_0193 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HPF32_0193 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPF32_0193 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPF32_0193 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPF32_0193 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPF32_0193 (glyA)
Enzymes [BR:
heq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPF32_0193 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAJ57775
LinkDB
All DBs
Position
194852..196102
Genome browser
AA seq
416 aa
AA seq
DB search
MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVTGEHANPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaacgaacatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttgacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttggccatagaaagggctaaa
aagctttttaattgccagttcgctaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagcttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttagatggctatattgattatgaagaagcgctaaaaatcgctcaa
agtgttaagccagaaatcattgtgtgcggattttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggagcgttattattaggcgatatagcccat
gtggcagggcttgtggtaaccggtgagcatgctaatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgtaattgctgctaaagcggtgggatttaaagagaatctgaaaccagaatttaaa
gcttatgcacaattagtgaaatctaacatgcaagttttggctaaagcgttacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttggat
aagccttatagcgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgtagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaagccatggctagtcaattccctgtgtatcaacaacctattttttaa
DBGET
integrated database retrieval system