Helicobacter pylori F32: HPF32_0443
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Entry
HPF32_0443 CDS
T01911
Symbol
rep
Name
(GenBank) rep helicase, single-stranded DNA-dependent ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
heq
Helicobacter pylori F32
Pathway
heq03420
Nucleotide excision repair
heq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPF32_0443 (rep)
03430 Mismatch repair
HPF32_0443 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heq03400
]
HPF32_0443 (rep)
Enzymes [BR:
heq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPF32_0443 (rep)
DNA repair and recombination proteins [BR:
heq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPF32_0443 (rep)
MMR (mismatch excision repair)
Other MMR factors
HPF32_0443 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
Viral_helicase1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAJ58025
LinkDB
All DBs
Position
complement(470874..472904)
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AA seq
676 aa
AA seq
DB search
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
ALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSHKNPEHTPYAAFYENILDEFENTK
KKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEV
VKSGHFNKPTLLNYSDNKAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICAFIFNPKDIMATIHVLSCISDIGSNTAKDIHEALMLLG
NGDLKLALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPK
ISLNGAKMLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFK
KLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaactttgcaattaaaccctgagcagctcaaagcggccaaggctttgaaaggg
tataatttagtgattgcgagcgctggcacaggaaagacttctacgattgtggggcgcatt
ttatacctgcttgataacggcatcaagcctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgattgcaagggtggctaaatattccaagttaagctccaaaatt
gaagcgggcactttccatgcggtggcgtatcgctatttaaaagagcattaccccaattta
agcctgaagcaacctaaagaattgaaaaaacttttagaaagcattgtggataccaaaaac
gcgctaacagatgacgataaaaagccctacacttcgcagcatctctacgccctctattct
ctttataccaacgctctaaaacaagaagactttagcgcatggctttctcataaaaaccct
gaacacacgccatacgccgccttttatgaaaacattttagacgaatttgaaaacaccaaa
aaaaagcataattatattgactataacgacttactgctattatttaaacaagcgatgcta
gaaaggcctagcccttataaagaagtgctttgcgatgaatttcaagacactaacccctta
caagaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgcttttaatggggcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccaggttttcacgctcactaaaaactaccgctcttctaaagagatttta
gatctcgctaatcaagtgatacagcacaacgagcgcatttaccctaaaaatttagaagtg
gtgaaatcagggcatttcaataaacccacgcttttaaattacagcgataataaagcgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaagaattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagccgctttaagatcccacaatgtgccc
agcaaaagaaaagggagcgcgagcttttttgaatccaaagaagtagcgttagcgttagac
atttgcgcgttcatctttaaccctaaagatattatggcaacaatccatgttttaagctgt
atcagcgatattggctctaacaccgctaaagacattcatgaggccttaatgcttttaggc
aatggcgatctcaaactagccctaacccacccaaataaagaagccaaaatttacacgaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgccctagaaaacagctca
aggtttaatagcgtgatagataaagcgtttcattcacacccggtgttgatgcaccctaaa
atctcactcaatggggctaaaatgcttagcgattttttcattctttataccaaagccccc
actcattcccctagcgctttaatcaaacacattctagaaagcgcgttttttcaaaccttt
aaaacacgccttttaaaagagcgctccaaaaataaggacggctcttataacgaatttaaa
aaactccaagcgcaaaaacgcttcaatgaaaaaatggacttgctgagttctttggctaaa
aattaccaaaatttagggcgttttttaaacggcactttaataggctctagtgaagccacg
caaggcgagggcgtgaatctattgagcgtgcatgcttctaaaggcttagaatttaaagat
gtttatattatagatttaatggagggccgtttccctaaccacaagctcatgaataccggt
gggggcattgaagaagagcggcggcttttttatgttgctatcacaagggctaaggaaaat
ttatggctttcttatgcgaaaaacgaattgagagaaaacgccaaacctaaagagcataag
ccctcggtgtttttgtatgaagcggggcttttgaaacccgatttaaaataa
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