Helicobacter pylori F32: HPF32_0523
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Entry
HPF32_0523 CDS
T01911
Symbol
cagA
Name
(GenBank) cag pathogenicity island protein
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
heq
Helicobacter pylori F32
Module
heq_M00564
Helicobacter pylori pathogenicity signature, cagA pathogenicity island
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
Motif
Other DBs
NCBI-ProteinID:
BAJ58105
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All DBs
Position
567055..570576
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AA seq
1173 aa
AA seq
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MTNETIDQTTTPDQTGFVPQRFINNLQVAFIKVDNAVASFDPDQKPIVDKNDKDNRQAFE
KISQLREEYANKAIKNPAKKNQYFSDFINKSNDLINKDNLIAVDSSVESFRKFGDQRYQI
FTSWVSLQKDPSKINTQQIRNFMENVIQPPISDDKEKAEFLRSAKQSFAGIIIGNQIRSD
EKFMGVFDESLKARQEAEKNAEPAGGDWLDIFLSFVFNKKQSSDLKETLNQEPRPDFEQN
LATTTTDIQGLPPEARDLLDERGNFFKFTLGDVEMLDVEGVADKDPNYKFNQLLIHNNAL
SSMLMGSHSNIEPEKVSLLYGDNGGPEARHDWNATVGYKNQQGNNVATLINAHLNNGSGL
IIAGNEDGIKNPSFYLYKEDQLTGLKQALSQEEIQNKVDFMEFLAQNNAKLDNLSEKEKE
KFQTEIENFQKDRKAYLDALGNDHIAFVSKKDPKHLALVTEFGNGELSYTLKDYGKKQDK
ALDGETKTTLQGSLKYDGVMFVNYSNFKYTNASKSPNKGLGTTNGVSHLEANFSKVAVFN
LPNLNNLAITNYIRRDLEDKLWAKGLSPQEANKLIKDFLNSNKEMVGKVSNFNKAVAEAK
NTGNYDEVKKAQKDLEKSLRKREHLEKEVAKKLESRNDNKNRMEAKAQANSQKDKIFALI
SQEASKEARVATFDPNLKGVRSELSDKLENINKNLKDFGKSFDELKSGKNNDFSKAEETL
KALKDSVKDLGINPEWISKIENLNAALNDFKNGKNKDFSKVTQAKSDLENSIKDVIINQK
ITDKVDNLNQAVSEIKLTGDFSKVEQALAELKNLSLDLGKNSDLQKSVKNGVNGTLVSNG
LSKTEATTLTKNFSDIRKELNEKLFGNSNNNNNGLKNNTEPIYAQVNKKKTGQATSPEEP
IYAQVAKKVSAKIDQLNEATSAINRKIDRINKIASAGKGVGGFSGAGRSASPEPIYATID
FDEANQAGFPLRRSAAVNDLSKVGLSREQELTRRIGDLSQAVSEAKTGHFGNLEQKIDEL
KDSTKKNALKLWVESAKQVPTSLQAKLDNYATNSHTRINSNVQSGTINEKATGMLTQKNP
EWLKLVNDKIVAHNVGSAPLSAYDKIGFNQKNMKDYSDSFKFSTKLNNAVKDIKSSFVQF
LTNTFSTGSYSLMKANVEHGVKNTNTKGGFQKS
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaaccattgatcaaacaacaacaccagaccaaacgggttttgttccgcaa
cgatttatcaataatcttcaagtagcttttatcaaagttgataacgctgtcgcttcattt
gatcctgatcaaaaaccaatcgttgataagaatgataaggataacaggcaagcttttgag
aaaatctcgcaactaagggaagaatacgccaataaagcgatcaaaaatcctgccaaaaag
aatcagtatttttcagactttatcaataagagcaatgatttgatcaacaaagacaatctc
attgctgtagattcttccgtagagagctttcggaaatttggggatcagcgttaccaaatt
tttacgagttgggtgtcccttcaaaaagatccgtctaaaatcaacacccaacaaatccga
aattttatggaaaatgtcatacaaccccctatctctgatgataaagaaaaagcggagttt
ttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaaatccgatcggat
gaaaaattcatgggcgtgtttgatgaatctttgaaagcaaggcaagaagcagaaaaaaat
gcagagcctgctggtggggattggcttgatatttttttatcatttgtatttaacaaaaaa
caatcttccgatctcaaagaaacgctcaatcaagagccaaggcctgattttgaacaaaat
ttagccactaccaccaccgacatacaaggcttaccgcctgaagctagagatttgcttgat
gaaaggggtaatttttttaaattcactcttggtgatgtggagatgttggatgttgaggga
gtcgctgacaaggatcccaattacaagttcaatcaattattgatccacaataacgcttta
tcttctatgctaatggggagtcatagtaacatagaacctgaaaaggtttcattattgtat
ggggataatggtggccctgaagctaggcatgattggaacgctaccgttggttataaaaac
caacaaggcaacaatgtggccacactcattaatgcgcatcttaataacggcagcgggtta
atcatagcgggtaatgaggatgggattaaaaaccctagcttctatctctataaagaagat
caactcacaggtttgaaacaagcgttgagtcaagaagagatccaaaacaaagtggatttc
atggaatttctcgcacaaaacaatgctaaattagacaacttgagcgagaaagagaaagaa
aaattccaaactgagattgaaaatttccaaaaagaccgtaaggcttatttggacgctcta
gggaatgatcacattgcttttgtttctaaaaaagacccaaaacatttagctttggttact
gagtttggtaatggggaattgagctatactctcaaagattatgggaaaaaacaagataaa
gctttagatggggagacaaaaaccactcttcaaggtagcctaaaatatgatggcgtgatg
tttgtcaattattctaatttcaaatacaccaacgcctccaagagtcctaataagggttta
ggcactacgaatggcgtttcccatttggaagcgaattttagcaaagtagctgtctttaat
ttgcctaatttaaataatctcgctatcactaattatataaggcgagatttagaagataaa
ctgtgggctaaaggattgtccccacaagaagctaataagctcatcaaagactttttaaac
agcaacaaagaaatggttggaaaagtttcaaacttcaataaagctgtagctgaagctaaa
aacacaggcaattatgatgaagtgaaaaaagctcagaaagatcttgaaaaatctctaagg
aaacgagagcatttagagaaagaagtagcgaaaaaattggagagcagaaacgacaacaaa
aatagaatggaagcaaaagctcaagctaacagccaaaaagataagatttttgcacttatc
agtcaagaggctagtaaggaagcaagagtggccactttcgatccgaatcttaaaggcgtc
aggagcgaattgtctgataaacttgaaaatatcaacaagaatttgaaagactttggcaaa
tcttttgatgaactcaaaagtggcaaaaataatgatttcagcaaggcagaagaaacgcta
aaagcccttaaagactcggtgaaagatttaggcatcaatccagaatggatttcaaaaatt
gaaaaccttaatgcagctttgaatgatttcaaaaatggcaaaaataaggatttcagcaag
gtaacacaagcaaaaagcgaccttgaaaattccattaaggatgtgatcattaatcaaaag
ataacggataaagttgacaatctcaatcaggctgtatcagagattaaattaacaggcgat
ttcagtaaggtagagcaagccctagccgaactcaaaaacttgtcattggatcttggaaaa
aattctgatctacaaaaatccgttaaaaatggtgtaaatggaaccctagtcagtaatggg
ttgtctaaaacagaagccacaacgctcaccaaaaatttttcggacatcaggaaagaattg
aacgagaaattatttggaaattccaataacaataataatggactcaaaaacaacacagag
cctatttatgctcaagttaataaaaagaaaacaggacaagcaactagccctgaagagccc
atttacgctcaagttgctaaaaaggtgagtgcaaaaattgaccaactcaacgaagctaca
tcagcaataaatagaaaaattgaccggattaacaaaattgcatcagcaggtaaaggagtg
ggcggtttcagtggagcagggcgatcagctagccctgaacccatttacgctacaattgat
tttgatgaggcaaatcaagcaggcttccctttgagaagaagtgctgcagttaatgatctc
agtaaagtagggctttcaagggaacaagaattgactcgtagaattggcgatctcagtcag
gcagtgtcagaagctaaaacaggtcattttggcaacctagaacaaaagatagatgaactc
aaagattctacaaaaaagaatgctttgaagctatgggttgaaagtgcgaaacaagtgcct
actagtttgcaagcgaaattggacaattacgctactaacagccacacacgcattaatagc
aatgtccaaagtggaacaatcaatgaaaaagcgaccggcatgctaacgcaaaaaaaccct
gagtggctcaagctcgtgaatgataagatagttgcgcataatgtgggaagtgctcctttg
tcagcgtatgataaaattggattcaaccaaaagaatatgaaagattattctgactcgttc
aagttttccaccaagttgaacaatgccgtaaaagacattaagtctagctttgtgcaattt
ttaaccaatacattttctacaggatcttacagcttgatgaaagcaaatgtggaacatgga
gtcaaaaatactaatacaaaaggtggtttccaaaaatcttaa
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