Helicobacter pylori F32: HPF32_0541
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Entry
HPF32_0541 CDS
T01911
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
heq
Helicobacter pylori F32
Pathway
heq00300
Lysine biosynthesis
heq00470
D-Amino acid metabolism
heq01100
Metabolic pathways
heq01110
Biosynthesis of secondary metabolites
heq01120
Microbial metabolism in diverse environments
heq01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPF32_0541 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPF32_0541 (dapF)
Enzymes [BR:
heq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HPF32_0541 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAJ58123
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All DBs
Position
complement(584469..585290)
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AA seq
273 aa
AA seq
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MVFYKYSGSGNDFLIVQSFKKKDFSNLAKQVCHRHEGFGADGLVVVLPSKDYDYEWDFYN
SDGSKAGMCGNASRCVGLFAYQHAIASKNHVFLAGKREISICIEEPNIIESNLGNYQILD
TIPALRCEKFFTNDSVLENIPTFYLIDTGVLHLVGFVENKEWLNSLNTLELRALRHEFNA
NINIAFIENKETIFLQTYERGVEDFTLACGTGMAAVFIAACIFYNTPKKATLIPKSNESL
ELSLKNDGIFYKGAVRYIGMSVLGMSVFDRYFL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttacaaatattcagggagtgggaatgattttttaatcgttcaaagtttcaaa
aaaaaagatttttcaaatttagccaaacaggtgtgccataggcatgagggttttggggct
gatgggcttgtagtcgtcttaccgagtaaggattatgactacgaatgggatttttacaat
tcagacggctctaaagctggcatgtgcgggaatgcgagccgttgcgtggggctatttgct
taccaacatgctatagcctctaaaaaccatgtttttttagccggaaaaagagagatttct
atttgcatagaagagcccaatattatagagagcaatcttggtaactatcaaattctagac
accatacccgccttaagatgcgaaaaattttttaccaatgacagcgttttagaaaatatc
cctactttctacctcatagatacaggagtgctgcatttagtaggatttgtggaaaataaa
gagtggttaaattctcttaacacgctggaattaagggctttaaggcatgagtttaacgct
aatattaacatcgcttttatagaaaataaagagacgatttttttacaaacttatgaaaga
ggggttgaagatttcacgctagcttgcgggacaggcatggcggcggtttttatcgctgcg
tgcattttttataacacgcctaaaaaagccactctcatccctaaaagcaacgaatcttta
gagctttctttaaaaaatgatggaattttttataaaggcgcggtgcgttatattggcatg
agtgttttgggcatgagtgtttttgatcgttatttcttgtaa
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