Helicobacter pylori F32: HPF32_0563
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Entry
HPF32_0563 CDS
T01911
Symbol
pabC
Name
(GenBank) hypothetical protein
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
heq
Helicobacter pylori F32
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
heq01011
]
HPF32_0563 (pabC)
Enzymes [BR:
heq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPF32_0563 (pabC)
Peptidoglycan biosynthesis and degradation proteins [BR:
heq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPF32_0563 (pabC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
PrpF
Motif
Other DBs
NCBI-ProteinID:
BAJ58145
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All DBs
Position
605418..606413
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AA seq
331 aa
AA seq
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MTTKRVNTATNKIMTLNTFLDTCFLLFISILFYLSIPIYPNKVVVVPQGSLKKVFFSLKD
QGVDINALDALFLRLMGMPKKGYIDMGDGALRKGDFLVRLIKAKAAYKSATLIPGESRYF
FTQILSETYQLKTSDLNQAYESIAPRLNGAVIEDGVIWSDTYHLPLGEDAFKIMQTLIGQ
SMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANVEEMPLIASVIFNRLKKGMPLQM
DGALNYQEFSHAKVTKERIKTDNTSYNTYKFKGLPKNPVGSVSLEAIKAVIFPKKTDFLY
FVKMPDKKHAFSATYKEHLKNINLSNNHFYD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaaaagagtgaatactgccacaaacaagataatgacattaaacactttcttg
gatacatgctttcttttattcattagtattcttttttatttaagtataccaatttatcct
aacaaagtggtggttgtcccgcaaggttcgctcaaaaaagtgtttttttctttaaaagat
caaggcgtggatattaacgctttggatgcactttttttacgcctgatgggcatgcctaaa
aaaggttatattgatatgggcgatggggctttaaggaagggggattttttagtccgtttg
attaaagcaaaagcggcgtataaaagcgcaactctaatccctggggaaagccgctatttt
ttcacgcaaattttgagcgagacttaccagctaaaaacaagcgatctcaatcaggcttat
gaaagcatcgctccacgattgaatggtgctgtgatagaagatggggtgatatggtcagac
acttatcatttgcctttaggggaggacgcttttaaaatcatgcaaactttgatcggccaa
tccatgaaaaaacacgaagctttaagcaaacaatggcttggatactaccataaagaagag
tggtttgaaaaaatcattctcgcttctattgtgcaaaaagaagccgctaatgttgaagaa
atgcctttgattgcgagcgtgatttttaaccgcttgaaaaaaggcatgcctttacaaatg
gatggggctttgaattatcaggaattttcacacgctaaagtaacaaaagagcgcattaaa
accgataacacctcctataatacctataaatttaagggcttgcctaaaaatcctgtaggg
agcgtgagcctagaagcgattaaagccgtgatcttccctaaaaaaactgatttcttgtat
tttgtgaaaatgccggataaaaaacatgctttcagcgcaacttataaggagcatttaaaa
aacattaatctttctaataatcatttttatgattag
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