Helicobacter pylori F32: HPF32_0999
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Entry
HPF32_0999 CDS
T01911
Symbol
topA_3
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
heq
Helicobacter pylori F32
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heq03032
]
HPF32_0999 (topA_3)
03400 DNA repair and recombination proteins [BR:
heq03400
]
HPF32_0999 (topA_3)
Enzymes [BR:
heq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPF32_0999 (topA_3)
DNA replication proteins [BR:
heq03032
]
Prokaryotic type
DNA Topoisomerases
HPF32_0999 (topA_3)
DNA repair and recombination proteins [BR:
heq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPF32_0999 (topA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
BAJ58581
LinkDB
All DBs
Position
1067305..1069368
Genome browser
AA seq
687 aa
AA seq
DB search
MKDSVIIIESPNKVAKVKEITGAKVFATIGHFMQLKSYDENNNFKPTFEYDSQKKKRIFE
IIEACKNKKVYIATDPDREGYAIGYHFYEKIKKIASSIYRAEFFEITPSGINKGLQNALL
FENTNKQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREI
EKFKALPENEKVSYQIQAKINDNANREVIIKHCDEKGEEIKFNDKEEALKLFESLKDNKA
CLLKDLKISVVETKPKKPFITSTLLERASSELGLGIAEVQSLAQSLFEAGLITYIRTDAE
SLSVEFLNEAESFYLPIYKEVYQKREYKAGKQSQAEAHEAIRITHPHKYEDLESIVYNAG
ITNQDALKLYRLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSAKSLKSTGFLAMFSKK
ELENDDESNDDKEDKEKEQNAQFNLKIDDMLSLNDLVLATIKRNAPSPYKEASFVKLLEN
KGIGRPSTYASYLSTLLKREYISISQDKKHTITPTHKGKRVIEVFENAYQFIIDLTYTKQ
MEEVLDEIVENKSSYLDFLQNLATKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLD
LSEEFKNYKEDNRIAKAFLDRYIKEHEFFEKNNKKASSSNNNEIRPATPKQINFAEILAK
KHNVKLPKDYKSNIKVCGDFINEYHKK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcgttattattattgaaagccctaataaagtggctaaggttaaagaaatc
acaggagcaaaggtctttgctaccatagggcattttatgcaacttaaaagctatgatgaa
aacaataactttaagccgacctttgaatacgactcacaaaagaaaaaacgtatttttgag
ataatagaggcatgtaaaaataaaaaggtttatattgctactgaccctgatagagagggt
tatgctataggctatcatttttatgaaaagattaaaaaaatagctagttctatttataga
gcggagttttttgaaatcacaccaagtgggattaacaaaggcttacaaaatgctctttta
tttgaaaacactaataagcaaatgtatcaaagtgccttagctagaagagtggctgatatg
cttttaggttttacgctctccccttatttaggcaaagctttagggcaaatgaaaggctct
agtgctggaagagtgcaaacgccttgcttaaagcttattgtagatagagacagagagatt
gaaaaatttaaggctttaccagaaaatgaaaaagtaagctatcaaatccaagctaagatt
aacgacaatgctaatagagaagtcatcattaagcattgtgatgaaaagggcgaagagatt
aaattcaatgataaagaagaggctttaaaactctttgaaagcttgaaagacaataaagca
tgtcttttaaaagatttaaaaatctctgttgtagagaccaaacctaaaaagccctttatc
acttctacgcttttagaaagagcgagttctgagttaggtttaggtatcgctgaagtgcaa
tctttagctcaaagtctctttgaggctggactaattacttatattagaacagatgctgaa
agtttgagcgtagagtttttaaatgaggcagagagcttttatttgcctatttataaagaa
gtgtatcaaaaaagagaatacaaggctggtaagcaaagccaagcagaagctcatgaagcc
attcgtatcacgcacccccacaaatacgaagatttagaaagcatagtctataatgctggt
atcactaatcaagacgctttaaaactctatagattgatttttgaaagaaccattgaaagt
caaggcaagaatgccatttatgacaagcaagatttgctctttaaaatcaaaaatgagtat
tttaaatgttctgctaagagtttaaaaagcactgggtttttagcaatgttttctaaaaaa
gagctagagaatgatgatgaaagcaatgatgacaaagaagataaagaaaaagagcaaaac
gcacaatttaatcttaaaattgatgatatgttaagtctaaatgacttagttttagctacc
attaaaagaaatgccccaagcccttataaagaggcaagttttgtcaagcttttagaaaat
aaaggcataggaagacctagcacttatgcgagttacttgtctactcttttaaaaagagaa
tatattagcattagccaagataaaaagcacaccattactcctacgcataagggtaaaaga
gtgatagaagtgtttgaaaatgcttatcaattcattattgatttgacctacaccaaacaa
atggaagaagtgctagatgagattgtagaaaataaaagctcatacttagattttttacaa
aatttagccactaaatgccctaagattgaaaaactagaaagaaatgatgatgagataaag
cctagtagtgaggggcaaatcacttatatagaaaacattttaagagatttgcaattagac
ttgagcgaagagtttaaaaactacaaagaagataatagaatagctaaggcatttttagac
agatacattaaagagcatgagttttttgagaaaaataataaaaaagctagtagctctaat
aataatgagattagacctgcgacacctaaacaaattaactttgctgaaatattagctaaa
aagcataatgtcaagctccctaaagattataaaagtaatatcaaagtgtgtggggatttt
atcaatgagtatcataagaagtag
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