Helicobacter pylori F32: HPF32_1030
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Entry
HPF32_1030 CDS
T01911
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
heq
Helicobacter pylori F32
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
heq03016
]
HPF32_1030 (truA)
Enzymes [BR:
heq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPF32_1030 (truA)
Transfer RNA biogenesis [BR:
heq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPF32_1030 (truA)
Prokaryotic type
HPF32_1030 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAJ58612
LinkDB
All DBs
Position
1097160..1097888
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AA seq
242 aa
AA seq
DB search
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSVVVAAGRTDKGVHANNQV
LSFCTPKHWNAAKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGATTNPKRTIFNAFAYKTFIAGHEC
VVFKVIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNIKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaagataagatagaaagcgctttaaatgcgctagggatt
aaaagcgttgtggttgcggctgggcgcacggataaaggcgtgcatgcgaacaatcaagtg
ctgtctttttgcactccaaaacactggaacgccgctaaattattttattatctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacaaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactagatgcgttaaacaccgctttaaag
caattcacaggcaagcatgatttttccatgtttaaaaaagaaggcggggcgacaaccaat
cctaaacgcaccatttttaacgcttttgcttataaaacctttatcgcagggcatgagtgc
gtggtgtttaaagtcattggcgatgcgtttttgcgctctagcgtgcgtttgatcattcaa
gcgtgcgttcaatactccttagaaaaaatcacgctcgctgaaattcaagcgcaaatccac
aacatcaaagccactataagaacgcccataatggctaatggattgtatttgcacagggtg
tattattga
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