Helicobacter pylori F32: HPF32_1160
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Entry
HPF32_1160 CDS
T01911
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
heq
Helicobacter pylori F32
Pathway
heq03030
DNA replication
heq03430
Mismatch repair
heq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPF32_1160 (holB)
03430 Mismatch repair
HPF32_1160 (holB)
03440 Homologous recombination
HPF32_1160 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heq03032
]
HPF32_1160 (holB)
03400 DNA repair and recombination proteins [BR:
heq03400
]
HPF32_1160 (holB)
Enzymes [BR:
heq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPF32_1160 (holB)
DNA replication proteins [BR:
heq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPF32_1160 (holB)
DNA repair and recombination proteins [BR:
heq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPF32_1160 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
IMD
Borrelia_orfD
Motif
Other DBs
NCBI-ProteinID:
BAJ58742
LinkDB
All DBs
Position
1243849..1244505
Genome browser
AA seq
218 aa
AA seq
DB search
MKNFNRLIYTDNLEESLEETASLFKHHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVISK
AHLKHSEPNAFLIAAPSYGIEAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKE
DKRQKIPLKPLDLDLSKLDLKDIYAFLKNLDKENFDSRENQRETIESLLESINRHKIPLN
EQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacttcaaccgccttatttatacggacaatcttgaagagagcctagaagagact
gcaagccttttcaagcaccacattaaattctacaccgagatcattgaaaaagacaaaaag
gtgatcaaaacttttaataaggattttaaaatagagcatgctaaagaagttatttcaaag
gcgcacttaaaacacagcgaaccaaacgcctttttaatcgctgcgcctagctatggcata
gaagcccaaaacgcgcttttaaagatcttagaagaacccccgaacaatgtttgttttatc
atgtttgctaaaagcccaaaccatgttttagccaccattaaatctcgcttgatcaaagaa
gacaagcgccaaaaaatccccctaaaacctttagatttggatttatcaaaattggatttg
aaagatatttatgcgtttttaaaaaatttagacaaagaaaattttgattccagagaaaat
cagagggaaacaattgaaagcctgttagagagtattaataggcataagatcccattaaac
gagcaagaattgcaagcctttgatttagcgatcaaggctaatagctcttattacaagctc
agctacaatcttttacccttacttttaagccttttatctaaaaagaaaacgccatga
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