Helicobacter pylori F32: HPF32_1314
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Entry
HPF32_1314 CDS
T01911
Name
(GenBank) conserved hypothetical ATP-binding protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
heq
Helicobacter pylori F32
Pathway
heq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPF32_1314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
heq03019
]
HPF32_1314
Messenger RNA biogenesis [BR:
heq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPF32_1314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
BAJ58896
LinkDB
All DBs
Position
complement(1389464..1391536)
Genome browser
AA seq
690 aa
AA seq
DB search
MTDNNHYENHENSSENSKADEMRAGAFERFTNRKKRFRENAQKNAEFSNHEAPSHHKKEC
HPNKKPNHHHKPKHAPQKTRNYAQEELDNNKVEGVTEILHVNERGTLGFHKELKKGVEAN
NKIQVEHLNPHYKMNLNSKASVKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSFPKEGL
FGVDILIPDFSYLHQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSK
FDEHGLKKYRSYFKIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFK
IDHTPVDNLPTDLYRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGR
VIMSTFSSNIHRVYQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEV
AKYPDNEVLIVTTGSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVL
NFLIKKEAKVAYQEFDNIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAIS
CGVPEKNIYLMEDGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTGIVQQREEVASAG
VFAATIFVNKNKQVLLESSQFSSLGLVGFKDEKHLTKEIQGGLELLLKSSNAEILNNPKK
LEDHTRNFIRKALFKKFRKYPAIICHVHAT
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgacggataacaaccattacgaaaatcatgaaaacagcagtgaaaattcaaaagctgat
gagatgcgagccggagcgtttgagcgattcaccaaccgcaaaaagcgtttcagagaaaac
gcgcaaaaaaacgcagagttttcaaaccatgaagcgccttcgcaccataaaaaagagtgc
caccccaacaaaaaaccaaaccaccaccacaaacctaaacatgccccccaaaagactaga
aattacgcccaagaagagctagataacaacaaagtagagggcgttacggaaattttgcat
gtgaatgagagagggactttaggctttcataaggagctaaaaaagggcgttgaagcgaat
aataagatccaggtggagcatttaaacccgcattataagatgaatctaaactctaaagcg
agcgttaaaatcacgcctttagggggcttgggcgagattggggggaacatgatggtcatt
gaaaccccaaaaagcgcgatcgtgattgatgcgggcatgagcttccctaaagaagggctt
tttggtgtggatattttaatcccggatttttcctacttgcaccaaatcaaggacaaaatc
gctggcattatcatcacccatgcccatgaagatcacataggggccacgccttatttgttt
aaagagttgcaattccccctttatggcacgcctttgagtttggggttgatcgggagcaaa
tttgatgaacatggtttgaaaaaataccgctcgtattttaaaatcgtagaaaagcgctgc
cccattagcgtgggcgaatttatcattgaatggatccacatcacgcattctatcattgac
agcagcgctttagcgatccaaactaaagccggaacgatcatccacaccggcgattttaaa
atcgatcacactccagtggataatttgcccacggatttgtatcgtttagcgcactatggc
gaaaagggggtgatgcttcttttaagcgattccaccaactcccataaatccgggaccaca
ccgagtgaaagcaccatagcgccggcttttgataccctttttaaagaagcgcaagggagg
gtgattatgagcaccttctctagcaatatccaccgggtgtatcaagccatccaatacggc
attaaatacaaccgcaagatcgctgtgatcgggcgctctatggaaaaaaacctagacatt
gccagagaattaggctatatccatttgccttatcaatcttttattgaagccaatgaagtc
gctaaatacccagacaatgaagtcttaatcgtaacgaccggctcacaaggcgaaaccatg
agcgcgctttatcgcatggcgactgatgaacaccgccacatttctatcaaacccaacgat
ttagtcatcatctctgctaaagccattcctggcaatgaagcgagcgtttcagcggtattg
aattttttaatcaaaaaagaagctaaagtggcttatcaagaatttgacaatatccatgtg
agcgggcatgccgcccaagaagagcaaaagctcatgttaagactcattaagcctaagttt
ttcttacccgtgcatggggaatataaccatgtcgcgcgccacaagcaaaccgctatttct
tgcggggtgcctgaaaaaaatatctatttaatggaagatggcgatcaagtggaagttggc
cctgcgttcattaaaaaagtaggcacgattaaaagcgggaaaagctatgtggataaccaa
agcaatttgagtattgatacaggtattgtgcaacaaagagaagaagtcgctagcgctggg
gtgtttgccgctacgatttttgtgaataaaaacaaacaagtgcttttagaaagctctcaa
ttttctagtttagggcttgtgggctttaaagatgaaaagcatttgacaaaagaaattcaa
gggggattggagttgttattgaaatccagcaacgccgaaattttgaataaccctaagaaa
ttagaagatcacacccgtaatttcatcagaaaagcgctctttaaaaagtttagaaaatac
ccggctatcatttgtcatgtccatgccacttga
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