Helicobacter pylori Rif1: C695_00045
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Entry
C695_00045 CDS
T02317
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
her
Helicobacter pylori Rif1
Pathway
her03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
her00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C695_00045 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
her03019
]
C695_00045 (groEL)
03110 Chaperones and folding catalysts [BR:
her03110
]
C695_00045 (groEL)
03029 Mitochondrial biogenesis [BR:
her03029
]
C695_00045 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
her04147
]
C695_00045 (groEL)
Enzymes [BR:
her01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C695_00045 (groEL)
Messenger RNA biogenesis [BR:
her03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C695_00045 (groEL)
Chaperones and folding catalysts [BR:
her03110
]
Heat shock proteins
HSP60 / Chaperonin
C695_00045 (groEL)
Mitochondrial biogenesis [BR:
her03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C695_00045 (groEL)
Exosome [BR:
her04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C695_00045 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
C695_00045 (groEL)
Exosomal proteins of breast cancer cells
C695_00045 (groEL)
Exosomal proteins of colorectal cancer cells
C695_00045 (groEL)
Exosomal proteins of bladder cancer cells
C695_00045 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFV42824
LinkDB
All DBs
Position
complement(7603..9243)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVI
SEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatcaaattttcagatagcgcgagaaaccttttatttgaaggcgtgaga
caactccatgacgctgttaaagtaaccatggggccaagaggcaggaacgtgttgatccaa
aaaagctatggcgctccaagcatcactaaagatggcgtgagcgtggctaaagagattgaa
ttaagttgcccggtagctaacatgggcgctcaactcgttaaagaagtagcgagcaaaacc
gctgatgctgccggcgatggcacgaccacagcgaccgtgctggcttatagcatttttaaa
gaaggtttgaggaacatcacggctggggctaaccctattgaagtgaaacgaggcatggat
aaagccgctgaagccattattaatgagcttaaaaaagcgagcaaaaaagtgggcggtaaa
gaagaaatcacccaagtggcgaccatttctgcaaactccgatcacaatatcgggaaactc
atcgctgacgctatggaaaaagtgggtaaagacggcgtgatcaccgttgaagaagctaag
ggcattgaagatgaactagatgttgtagaaggcatgcaatttgatagaggctacctctcc
ccttattttgtaacaaacgctgagaaaatgaccgctcaattggataacgcttacatcctt
ttaacggataaaaaaatctctagcatgaaagacattctcccgctactagaaaaaaccatg
aaagagggcaaaccgcttttaatcatcgctgaagacattgagggcgaagctttaacgact
ctagtggtgaataaattaagaggcgtgttgaatatcgcagcggttaaagctccaggcttt
ggggacagaagaaaagaaatgctcaaagacatcgctattttaaccggcggtcaagttatt
agcgaagaattgggcttgagtctagaaaacgctgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggccatagccatgat
gtcaaagacagagtcgcgcaaatcaaaacccaaattgcaagcacgacaagcgattatgac
aaagaaaaattgcaagaaaggttggctaaactctctggcggtgtggctgtgattaaagtg
ggcgctgcgagtgaagtggaaatgaaagagaaaaaagaccgggttgatgatgcgttgagc
gcgactaaagcggctgttgaagaaggtattgtgattggcggcggtgcggctctcattcgc
gcggctcaaaaagtgcatttgaatttgcacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattagctcaaatcgctatcaatgccggttatgatggcggt
gtggtcgtgaatgaagtagaaaaacacgaagggcattttggttttaacgctagcaatggc
aagtatgtggatatgtttaaagaaggcattattgaccccttaaaagtagaaaggatcgct
ttacaaaatgcggtttcggtttcaagcctgcttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcggccccagcaatgcctgatatgggtggcatgggcggtatggga
ggcatgggtggcatgatgtaa
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