Helicobacter pylori Rif1: C695_00060
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Entry
C695_00060 CDS
T02317
Name
(GenBank) hypothetical protein
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
her
Helicobacter pylori Rif1
Pathway
her04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
her00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C695_00060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
her03016
]
C695_00060
Enzymes [BR:
her01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
C695_00060
Transfer RNA biogenesis [BR:
her03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
C695_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFACT-R_2
tRNA_Me_trans
Arginosuc_synth
QueC
ThiI
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AFV42827
LinkDB
All DBs
Position
11587..12639
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AA seq
350 aa
AA seq
DB search
MKKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKL
LVCDIREQFFNDVLFKPKYGYGKYFNPCIDCHANMFRNAFYKMLELNADFVLSGEVLGQR
PKSQRKEALNQVRKLVREVGEEARFDPVLDRTQAGGKKPQFLDELLLRPMSAKLLEPTFM
EKKGFVDREKLLDVSGRGRSRQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYRE
MVFEDSVIVKNGRYFVLPHNARLVVARNEEENHKLDIQHPLMDKIELLNCKGPLSLVDKN
ASKEDKELAGRIALGYAKTLKNQAYLIQIGDEKRELYPLDKENAREYLFA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagattaaagctttagccttattcagtggggggttggatagtttgttgtccatg
aaattactcattgatcaaggcattgaagtaaccgctttgcactttaatatagggtttggg
gggaataaagataaaagagagtattttgaaaacgccaccgcgcaaattggggctaagctc
ttggtgtgcgatattagagagcagttttttaacgatgtgttgttcaagcccaaatacggc
tatgggaaatatttcaacccttgcattgactgccatgccaacatgtttaggaacgctttt
tataaaatgcttgaattgaacgcggattttgttttgagcggggaagtgctagggcaacgc
cctaaatcccaaaggaaagaagcgctcaatcaggtgaggaaattagtcagagaagtgggc
gaagaggcgcgttttgatcccgttttagaccgaacgcaagcaggtggtaaaaaaccgcaa
tttttagatgagttgttattgcgacccatgagcgctaaactcttagagcctacttttatg
gaaaaaaagggttttgttgatagagaaaagcttttagatgtgagtggtagggggcgaagc
aggcaattgcaaatgatcaaagattatggcttgaaatattatgaaaagccaggtggaggg
tgtttgcttacagacattcaagtgagcaataagattaagaatttgaaagaatacagagaa
atggtgtttgaagacagcgtgattgtcaaaaacgggcgttattttgtcttaccccataac
gctcgcttggtggtggcaaggaatgaagaagaaaaccataaattggatattcaacacccc
ttaatggataagattgaattactaaactgtaaaggccctttgagtttggtggataaaaac
gctagcaaagaagataaagaattagccggccgtatcgctttaggctatgctaagacttta
aaaaatcaagcttacctcattcaaataggggatgaaaagcgcgagctttaccctttggat
aaagagaacgctagggaatatttgttcgcttga
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