Helicobacter pylori Rif1: C695_00910
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Entry
C695_00910 CDS
T02317
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00260
Glycine, serine and threonine metabolism
her00460
Cyanoamino acid metabolism
her00630
Glyoxylate and dicarboxylate metabolism
her00670
One carbon pool by folate
her00680
Methane metabolism
her01100
Metabolic pathways
her01110
Biosynthesis of secondary metabolites
her01120
Microbial metabolism in diverse environments
her01200
Carbon metabolism
her01230
Biosynthesis of amino acids
her01240
Biosynthesis of cofactors
her04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C695_00910
09102 Energy metabolism
00680 Methane metabolism
C695_00910
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C695_00910
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C695_00910
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C695_00910
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C695_00910
Enzymes [BR:
her01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C695_00910
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFV42997
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Position
190187..191437
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVTGEHAHPFPHCHVVSSTTHKTLRGPRGGIILTND
EEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALKEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMVNQFPVYHQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctaccctaacaagcgc
tattatggaggctgtgaagtggtggataaaatagaaagcctagccatagaaagggctaaa
aagctttttaattgccagttcgctaacgtgcaagcgcattcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttggatggctatattgattatgaagaggcgctaaaaatcgctcaa
agcgttaagccagaaatcatcgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggggcgttactattaggcgatatagcccat
gtggcagggcttgtggtaaccggtgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggattattttaactaatgat
gaagagatagcggctaagattgacaaagcgatttttccaggaactcaaggcgggcctttg
atgcatgtgattgctgctaaagcggtgggttttaaagagaatctaaaaccagaatttaaa
gcttatgcacaattagtgaaatctaacatgcaagttttggctaaagcgttaaaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggattttttagat
aagccttatagcgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggtgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaagccatggtcaatcaattccctgtgtaccaccaacctattttttaa
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