KEGG   Helicobacter pylori Rif1: C695_01460
Entry
C695_01460        CDS       T02317                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
her  Helicobacter pylori Rif1
Pathway
her00300  Lysine biosynthesis
her00470  D-Amino acid metabolism
her01100  Metabolic pathways
her01110  Biosynthesis of secondary metabolites
her01120  Microbial metabolism in diverse environments
her01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:her00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    C695_01460
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    C695_01460
Enzymes [BR:her01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     C695_01460
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AFV43107
LinkDB
Position
306756..307973
AA seq 405 aa
MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIE
TIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPV
SVHFHIGSQLSDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPS
LYHAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEEEGLKGV
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaaatctttg
atttgctacgctttaaaggcgaattccaatttgagtatcctctctttattggcacattta
gagagcggggcggattgcgtttccataggcgagatatatagggctttaaaagccgggatc
aagccttataggatcgtgtttagcggggtgggtaaaagcggatttgaaatagaacaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattaacaacgattgaa
acaatcgctcaatctttagggataaaggccaggatttccattcgaatcaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataaattcggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctgtt
agcgtgcattttcatatcggctcacagctatcagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatcgcgctagggatagatttgcgttttttt
gatgtgggcggaggcattggcgtgagctatgaaaatgaagaaacgattaagctttatgat
tacgcgcaagggattttaaattcgcttcaaggcttggatttgacgattatttgtgagccg
ggccgctcgatcgtggccgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtggttgtggatgcgggcatgaatgattttttacgtccgagt
ttgtatcatgctaagcatgccataagggttataacgccctctaaggggcgtgagatttcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaagacgcccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggccagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcac
aaaatcagagtgataagaaaaagagaggctttagaagatttatggcggttagaagaagaa
ggcttaaaaggggtttga

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