Helicobacter pylori Rif1: C695_01460
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Entry
C695_01460 CDS
T02317
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00300
Lysine biosynthesis
her00470
D-Amino acid metabolism
her01100
Metabolic pathways
her01110
Biosynthesis of secondary metabolites
her01120
Microbial metabolism in diverse environments
her01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C695_01460
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C695_01460
Enzymes [BR:
her01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C695_01460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AFV43107
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Position
306756..307973
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AA seq
405 aa
AA seq
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MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIE
TIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPV
SVHFHIGSQLSDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPS
LYHAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaaatctttg
atttgctacgctttaaaggcgaattccaatttgagtatcctctctttattggcacattta
gagagcggggcggattgcgtttccataggcgagatatatagggctttaaaagccgggatc
aagccttataggatcgtgtttagcggggtgggtaaaagcggatttgaaatagaacaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattaacaacgattgaa
acaatcgctcaatctttagggataaaggccaggatttccattcgaatcaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataaattcggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctgtt
agcgtgcattttcatatcggctcacagctatcagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatcgcgctagggatagatttgcgttttttt
gatgtgggcggaggcattggcgtgagctatgaaaatgaagaaacgattaagctttatgat
tacgcgcaagggattttaaattcgcttcaaggcttggatttgacgattatttgtgagccg
ggccgctcgatcgtggccgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtggttgtggatgcgggcatgaatgattttttacgtccgagt
ttgtatcatgctaagcatgccataagggttataacgccctctaaggggcgtgagatttcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaagacgcccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggccagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcac
aaaatcagagtgataagaaaaagagaggctttagaagatttatggcggttagaagaagaa
ggcttaaaaggggtttga
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