Helicobacter pylori Rif1: C695_01880
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Entry
C695_01880 CDS
T02317
Name
(GenBank) biotin carboxylase
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00061
Fatty acid biosynthesis
her00620
Pyruvate metabolism
her00640
Propanoate metabolism
her00720
Other carbon fixation pathways
her01100
Metabolic pathways
her01110
Biosynthesis of secondary metabolites
her01120
Microbial metabolism in diverse environments
her01200
Carbon metabolism
her01212
Fatty acid metabolism
Module
her_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
C695_01880
00640 Propanoate metabolism
C695_01880
09102 Energy metabolism
00720 Other carbon fixation pathways
C695_01880
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C695_01880
Enzymes [BR:
her01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
C695_01880
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
C695_01880
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_C
Biotin_carb_N
Dala_Dala_lig_C
ATP-grasp
RimK
ATPgrasp_ST
ATP-grasp_3
ATP-grasp_5
ATPgrasp_Ter
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
AFV43185
LinkDB
All DBs
Position
complement(378261..379628)
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AA seq
455 aa
AA seq
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MNKENKKVEKKELSRILIANRGEIALRAIQTIQEMGKESIAIYSIADKDAHYLNTASAKV
CIGGAKSSESYLNIPAIISAAELFEADAIFPGYGFLSENQNFVEICSHHSLEFIGPSAKV
MALMSDKSKAKSVMKEAGMPVIEGSDGLLKSYQEAEEIADKIGYPVIIKAAAGGGGRGMR
VVGDKSKLKNLYLAAETEALSAFGDGSVYLEKFINKPKHIEVQILADKHGNVIHVGERDC
SVQRRQQKLIEETPAVVLEEGVRERLLETAIKAAKYIGYVGAGTFEFLLDSNMKDFYFME
MNTRLQVEHTISEMVSGLNLIEWMIKIAQGEKLPKQESFSLKGHAIECRITAEDPKKFYP
SPGKITEWIAPGGVNVRLDSHAHANYVVPTHYDSMIGKLIVWGENRERAIAKMKRALKEF
KVEGIKTTIPFHLEMLENADFRQAKIHTKYLEENF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagaaaataaaaaggtagaaaaaaaagagctttcacgcattttgatcgctaat
agaggcgagatcgctttaagagcgatccaaaccattcaagaaatgggtaaagaatccata
gccatttattctatcgctgacaaggacgcccactacctcaatacggctagcgcaaaagtg
tgtatagggggggccaaatccagcgagagctacttgaatatccctgcgatcattagcgcg
gcggaattgtttgaagcggatgcgattttccccgggtatgggtttttgagcgagaatcag
aattttgtagagatttgctcgcaccattctttagaatttattggtccaagcgcgaaggtc
atggctttaatgagcgataaatccaaggccaaaagcgtgatgaaggaagccggcatgcct
gtgattgagggcagtgatgggttgcttaaaagctatcaagaagctgaagaaatcgctgat
aaaatcggctaccctgtcatcattaaagcagccgctggtgggggcgggagaggcatgcgt
gtcgtaggagataaatccaagcttaaaaacctttatttagccgcagaaacggaagctttg
agcgcgtttggcgatgggagcgtgtatttagaaaagttcatcaacaagcccaagcacatt
gaagtccaaattctagccgataagcatggcaatgtcattcatgtgggcgaaagggattgc
tcggtgcaaagacgccaacaaaagctcattgaagaaaccccggcagtggttttagaagag
ggcgtgcgtgagcgtttgctagaaacagcgatcaaggccgctaaatatatcggctatgtg
ggggcggggacttttgaatttttgttggattctaacatgaaagatttttatttcatggag
atgaacactcgtttgcaagtggaacacaccattagcgaaatggtgagcgggttaaacctc
attgagtggatgattaaaatcgctcaaggcgaaaaattgcccaagcaagaaagcttttct
ctcaaagggcatgcgatagaatgccgaatcacggcagaagatcctaaaaaattctaccca
agcccgggcaaaattaccgaatggatcgctcctggtggggtgaatgtgcgccttgattcg
cacgcgcatgccaattatgtcgtgcctacgcactatgattcgatgattggcaagctcatt
gtgtggggtgaaaacagagaaagagcgatcgctaagatgaaaagggctttaaaggaattt
aaagtagaaggcattaaaacgaccattcctttccaccttgaaatgcttgaaaatgcggat
ttcaggcaagcaaaaatccacacgaagtatttagaagaaaatttttaa
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