Helicobacter pylori Rif1: C695_01900
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Entry
C695_01900 CDS
T02317
Name
(GenBank) 16S ribosomal RNA methyltransferase RsmE
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
her
Helicobacter pylori Rif1
Brite
KEGG Orthology (KO) [BR:
her00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
her03009
]
C695_01900
Enzymes [BR:
her01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
C695_01900
Ribosome biogenesis [BR:
her03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
C695_01900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
AFV43189
LinkDB
All DBs
Position
complement(383094..383774)
Genome browser
AA seq
226 aa
AA seq
DB search
MRFVYHPLAKEPVLKIEGESYTHLYRSRRVKSASRLDLRNLKDGFLYTYEHAEITKKHAL
LKLVGARLLEVMASKKTHLILSVIEIKNIEKILPFLNQLGVSKLSLFYADFSQRNEKIDI
AKLERFQKILIHSCEQCGRSALMELEVFSNTKEALKAYPKASVLDFKGETLPASADFEKG
VIIGPEGGFSEPERGYFKEREIYRIPLDMVLKSESACVFVASIAQV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgtctatcaccctttagccaaagagcctgttttaaaaatagaaggcgagagt
tatacgcatttataccgatcaaggcgtgtcaaaagtgcgagtcgtttggatttgagaaat
ttaaaagacggctttttatacacctatgagcatgcagaaatcactaaaaaacacgccctt
ttaaagctagtgggcgcgcgattattagaggttatggccagtaaaaaaacgcatttgatt
ttaagcgtgattgaaatcaaaaacattgaaaaaatcctaccctttttaaatcagttaggc
gtgagcaagttgagtttattctatgcggattttagccaacgcaatgaaaaaatagacatc
gctaaattagagcgctttcaaaagattttgatccattcttgcgagcagtgtggtaggagt
gctttaatggaattggaagtgttttcaaacactaaagaggcgctaaaagcctatcctaag
gcgagcgttttggattttaagggcgaaaccttacccgcaagcgcggattttgaaaagggc
gttatcatagggcctgaggggggctttagcgaaccagaaagagggtattttaaagagcgt
gaaatttatcgcatcccgttagatatggtgctaaagtctgagagtgcatgcgtgtttgta
gcgagtatcgcacaagtttag
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